Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
VAPAQ9P0L0 ANP32BP3-201ENST00000559213 706 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.86□□□□□ -2.11
VAPAQ9P0L0 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.86□□□□□ -2.11
VAPAQ9P0L0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.86□□□□□ -2.11
VAPAQ9P0L0 UBE2L4-201ENST00000587688 464 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.86□□□□□ -2.11
VAPAQ9P0L0 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.86□□□□□ -2.11
VAPAQ9P0L0 AC025165.5-201ENST00000602802 578 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 AC098826.3-201ENST00000603823 466 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 AL160281.1-201ENST00000605307 311 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 RPL21P136-201ENST00000605378 396 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 AC068276.1-201ENST00000605793 379 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 AC090186.1-201ENST00000605991 572 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 AC024060.1-201ENST00000607052 494 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
VAPAQ9P0L0 AP001486.3-201ENST00000615334 372 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 AC123767.1-202ENST00000620407 817 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 AL158801.5-201ENST00000623123 465 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
VAPAQ9P0L0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.86□□□□□ -2.11
VAPAQ9P0L0 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
VAPAQ9P0L0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
VAPAQ9P0L0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.85□□□□□ -2.11
VAPAQ9P0L0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
VAPAQ9P0L0 RNU4-51P-201ENST00000364206 140 ntBASIC1.85□□□□□ -2.11
VAPAQ9P0L0 RNU6-777P-201ENST00000364265 104 ntBASIC1.85□□□□□ -2.11
VAPAQ9P0L0 MIR1284-201ENST00000408337 120 ntBASIC1.85□□□□□ -2.11
VAPAQ9P0L0 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
VAPAQ9P0L0 AL030996.1-201ENST00000411430 235 ntBASIC1.85□□□□□ -2.11
VAPAQ9P0L0 MTCO2P25-201ENST00000447065 681 ntBASIC1.85□□□□□ -2.11
VAPAQ9P0L0 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.85□□□□□ -2.11
VAPAQ9P0L0 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.85□□□□□ -2.11
VAPAQ9P0L0 RPL37P6-201ENST00000460682 294 ntBASIC1.85□□□□□ -2.11
VAPAQ9P0L0 AC055731.1-201ENST00000474387 401 ntBASIC1.85□□□□□ -2.11
VAPAQ9P0L0 MTAPP1-201ENST00000489154 819 ntBASIC1.85□□□□□ -2.11
VAPAQ9P0L0 AC112198.4-201ENST00000515450 351 ntBASIC1.85□□□□□ -2.11
VAPAQ9P0L0 SNORA25.11-201ENST00000515935 105 ntBASIC1.85□□□□□ -2.11
VAPAQ9P0L0 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.85□□□□□ -2.11
VAPAQ9P0L0 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.85□□□□□ -2.11
VAPAQ9P0L0 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.85□□□□□ -2.11
VAPAQ9P0L0 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.85□□□□□ -2.11
VAPAQ9P0L0 ROCK1P1-201ENST00000573767 549 ntBASIC1.85□□□□□ -2.11
VAPAQ9P0L0 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.85□□□□□ -2.11
VAPAQ9P0L0 NRBF2P1-201ENST00000587407 859 ntBASIC1.85□□□□□ -2.11
VAPAQ9P0L0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.85□□□□□ -2.11
VAPAQ9P0L0 AC073544.2-201ENST00000601155 540 ntBASIC1.85□□□□□ -2.11
VAPAQ9P0L0 AL096840.1-201ENST00000603287 93 ntBASIC1.85□□□□□ -2.11
VAPAQ9P0L0 AL355598.1-201ENST00000604169 202 ntBASIC1.85□□□□□ -2.11
VAPAQ9P0L0 AL138963.2-201ENST00000605137 226 ntBASIC1.85□□□□□ -2.11
VAPAQ9P0L0 AC006270.3-201ENST00000605967 1036 ntBASIC1.85□□□□□ -2.11
VAPAQ9P0L0 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.85□□□□□ -2.11
VAPAQ9P0L0 AC103710.1-201ENST00000610003 901 ntBASIC1.85□□□□□ -2.11
VAPAQ9P0L0 YWHAEP7-203ENST00000622054 312 ntBASIC1.85□□□□□ -2.11
VAPAQ9P0L0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
VAPAQ9P0L0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
VAPAQ9P0L0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
VAPAQ9P0L0 RNU6-512P-201ENST00000364438 103 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.84□□□□□ -2.11
VAPAQ9P0L0 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.84□□□□□ -2.11
VAPAQ9P0L0 SNORA67.3-201ENST00000384366 140 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 SNORA64-201ENST00000384674 134 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 AL139397.2-201ENST00000404529 772 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.84□□□□□ -2.11
VAPAQ9P0L0 PTGES3P4-201ENST00000426243 356 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.84□□□□□ -2.11
VAPAQ9P0L0 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.84□□□□□ -2.11
VAPAQ9P0L0 EEF1E1P1-201ENST00000446998 430 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 PAXBP1P1-201ENST00000449315 447 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
VAPAQ9P0L0 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.84□□□□□ -2.11
VAPAQ9P0L0 MTND1P16-201ENST00000465177 898 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 RN7SL274P-201ENST00000492268 272 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 AC008526.1-201ENST00000509149 338 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 AC093281.2-201ENST00000510153 597 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
VAPAQ9P0L0 SMURF2P1-201ENST00000514992 481 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 RNU2-44P-201ENST00000516795 194 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 SNORA31.25-201ENST00000517242 134 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.84□□□□□ -2.11
VAPAQ9P0L0 FAM92A1P1-201ENST00000528023 890 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.84□□□□□ -2.11
VAPAQ9P0L0 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.84□□□□□ -2.11
VAPAQ9P0L0 AC093012.1-202ENST00000549403 582 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 MRPS36P5-201ENST00000551909 298 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 AC009063.1-201ENST00000563342 702 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 AL049838.1-201ENST00000563647 981 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 AC007229.1-201ENST00000590455 412 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.84□□□□□ -2.11
VAPAQ9P0L0 BNIP3P26-201ENST00000600827 554 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 MTCYBP22-201ENST00000603788 447 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 RNU6-1192P-201ENST00000612197 107 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 AC011939.3-201ENST00000613686 466 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 AC107308.1-201ENST00000615897 301 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 RNU6-489P-201ENST00000618289 107 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 AL109620.1-201ENST00000618738 1197 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 AC112204.3-201ENST00000623822 332 ntBASIC1.84□□□□□ -2.11
VAPAQ9P0L0 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.83□□□□□ -2.12
VAPAQ9P0L0 RNU6-298P-201ENST00000390888 96 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms