Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AC126389.1-201ENST00000477436 290 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 HMGB1P22-201ENST00000505315 124 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 RNU1-61P-201ENST00000516107 151 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 RNU6-390P-201ENST00000516259 103 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 SNORA40.12-201ENST00000516329 111 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 RNU6-358P-201ENST00000516564 75 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 NRON-201ENST00000517270 370 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 AC118273.2-201ENST00000532092 465 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 AC055876.1-202ENST00000567053 138 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 AC012182.1-201ENST00000570133 895 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 SNHG22-203ENST00000617833 660 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 AC007318.2-201ENST00000620999 243 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 DUXAP9-208ENST00000622815 614 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 AC024614.3-201ENST00000637860 256 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 CKAP2P1-201ENST00000555477 2049 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 AC006020.1-201ENST00000420179 1854 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 AC073325.2-201ENST00000339545 159 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 RNU6-50P-201ENST00000362356 103 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 RNY3P3-201ENST00000363816 102 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 AL359634.1-202ENST00000404721 284 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 OR51A5P-201ENST00000415429 942 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 ZNF90P2-204ENST00000419323 1075 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 MTCYBP8-201ENST00000422855 651 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 MTCO1P39-201ENST00000426148 480 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 RPS29P15-201ENST00000458329 171 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 AC116562.3-201ENST00000506136 177 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 KLHL2P1-201ENST00000508691 521 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 RN7SKP43-201ENST00000516173 320 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 SNORD27.1-201ENST00000516319 72 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 RNU6-1092P-201ENST00000516955 87 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 AC100870.1-201ENST00000522035 505 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 AC068587.5-201ENST00000528506 175 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 AL035413.2-201ENST00000604801 525 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 AC073657.2-201ENST00000605661 303 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 AC008945.2-201ENST00000606056 604 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 RMST_3.1-201ENST00000611651 109 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 AC084757.4-201ENST00000616350 526 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 AC024940.5-201ENST00000622889 474 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
SMARCAL1Q9NZC9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
SMARCAL1Q9NZC9 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 RNU6-451P-201ENST00000362921 107 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 RNU6-1284P-201ENST00000363701 100 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 RNU4-48P-201ENST00000365559 182 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 RNU6-701P-201ENST00000384059 107 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 RNU6-76P-201ENST00000384060 104 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 RNU6-606P-201ENST00000384721 111 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 MIR23A-201ENST00000385245 73 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 MT-TL1-201ENST00000386347 75 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 FGF7P8-201ENST00000402994 292 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AL357075.1-201ENST00000404107 726 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 TXNP7-201ENST00000406296 293 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AL354719.1-201ENST00000406535 843 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 OR9R1P-201ENST00000412200 877 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AC138393.2-201ENST00000414742 246 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 SEPT14P3-201ENST00000439401 183 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 RPL26P6-201ENST00000440913 438 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AL121871.1-201ENST00000443413 436 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AL732372.2-207ENST00000445840 183 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AL671855.1-201ENST00000446875 1203 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 SEPT14P2-201ENST00000453405 183 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 SNORD97-201ENST00000459187 142 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 RNU6-261P-201ENST00000459506 102 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 MRPS17P3-201ENST00000465453 385 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms