Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 AP001025.1-201ENST00000486139 332 ntBASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 SNRPCP2-201ENST00000504370 475 ntBASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 RNY3P16-201ENST00000516338 101 ntBASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 RNU6-612P-201ENST00000516909 102 ntBASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 EDDM3DP-201ENST00000554692 434 ntBASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 MIR5692C2-201ENST00000577959 77 ntBASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 RN7SL290P-201ENST00000578661 300 ntBASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 AC074101.1-201ENST00000637861 241 ntBASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 AC100821.1-201ENST00000523153 2479 ntBASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CUEDC1Q9NWM3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.09□□□□□ -1.6
CUEDC1Q9NWM3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CUEDC1Q9NWM3 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.6
CUEDC1Q9NWM3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 SMG1P4-204ENST00000523028 4131 ntBASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 OR14L1P-202ENST00000641545 3009 ntBASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 AC083843.3-201ENST00000623679 2186 ntBASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 U3.6-201ENST00000363622 211 ntBASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 RN7SKP227-201ENST00000364445 330 ntBASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-312P-201ENST00000364629 107 ntBASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 Y_RNA.261-201ENST00000364631 102 ntBASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-1325P-201ENST00000364905 105 ntBASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-21P-201ENST00000384710 107 ntBASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 RPL19P16-201ENST00000433839 588 ntBASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 HIGD1AP2-201ENST00000446367 280 ntBASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 SNRPGP5-201ENST00000456003 220 ntBASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 RPL31P13-201ENST00000484151 370 ntBASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 AC083982.1-201ENST00000485679 344 ntBASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-426P-201ENST00000516464 97 ntBASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 TRAV37-201ENST00000553906 342 ntBASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 AC074050.1-201ENST00000563247 211 ntBASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 MIR3684-201ENST00000579779 74 ntBASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 MIR4423-201ENST00000580922 80 ntBASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 Z99571.1-201ENST00000636677 394 ntBASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 AC009812.4-201ENST00000569134 1805 ntBASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.08□□□□□ -1.6
CUEDC1Q9NWM3 AC099654.2-201ENST00000433031 1980 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 AC104260.2-201ENST00000623551 3497 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 MIR410-201ENST00000362222 80 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-834P-201ENST00000362367 110 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 SNORA31-201ENST00000362607 130 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-37P-201ENST00000362692 107 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 Y_RNA.136-201ENST00000363444 102 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-11P-201ENST00000364234 107 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-7-201ENST00000364784 107 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-8-201ENST00000365467 107 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-25P-201ENST00000383873 107 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-1-201ENST00000383898 107 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-36P-201ENST00000384172 107 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-4P-201ENST00000384205 107 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-5P-201ENST00000384238 107 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-3P-201ENST00000384314 107 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-16P-201ENST00000384385 107 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-15P-201ENST00000384534 107 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-2-201ENST00000384627 107 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-29P-201ENST00000384637 107 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-9-201ENST00000384776 107 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 RNA5SP241-201ENST00000391326 114 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 SNORA11-201ENST00000408789 128 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 AL390729.2-201ENST00000416137 156 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 AL117339.3-201ENST00000418733 162 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 OOSP1P1-201ENST00000423265 274 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms