Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 GMFBP1-201ENST00000467831 427 ntBASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 AC083798.1-201ENST00000472671 131 ntBASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 SNORA40.12-201ENST00000516329 111 ntBASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 AC136619.2-201ENST00000563361 631 ntBASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 AC008752.3-201ENST00000588113 712 ntBASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 AC099506.2-201ENST00000623074 221 ntBASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 AC009093.8-201ENST00000641769 292 ntBASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 MTND4P5-201ENST00000435821 1374 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 AL139276.1-201ENST00000311910 1001 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 RNU6-996P-201ENST00000365438 107 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 SNORA4.3-201ENST00000365564 137 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 Y_RNA.372-201ENST00000365599 102 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 RNU6-517P-201ENST00000384362 110 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 RNU6-780P-201ENST00000391030 104 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 RNA5SP252-201ENST00000391131 119 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 AL591416.1-201ENST00000404015 867 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 AL354719.1-201ENST00000406535 843 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 AL590002.1-201ENST00000406554 418 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 RNA5SP229-201ENST00000410809 99 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 OR6C66P-201ENST00000414917 930 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 MTND1P4-201ENST00000435196 415 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 AC016691.1-201ENST00000441321 413 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 snoU13.28-201ENST00000459235 104 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 RNU6-261P-201ENST00000459506 102 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 RPL21P8-201ENST00000465083 535 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 AC092185.1-201ENST00000491371 97 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 EIF4EP3-201ENST00000498782 656 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 RN7SKP219-201ENST00000516825 296 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 AL512360.1-201ENST00000555346 234 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 AC068135.2-201ENST00000569293 1028 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 MTATP6P3-201ENST00000581686 676 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 AP003465.2-201ENST00000602571 373 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 AL133393.1-201ENST00000603277 287 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 AC008945.2-201ENST00000606056 604 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 AP001596.2-201ENST00000608410 312 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 AC093788.1-201ENST00000609356 927 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 DUSP12P1-201ENST00000612874 516 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 MIR7153-201ENST00000637758 57 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 AC010680.1-201ENST00000590024 3590 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 AL079305.1-201ENST00000623159 3008 ntBASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.13□□□□□ -1.91
SLC6A13Q9NSD5 AC233263.6-201ENST00000631132 1963 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 GABRG2-229ENST00000641017 3628 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 AC006020.1-201ENST00000420179 1854 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 MIR208A-201ENST00000362287 71 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 SNORD46.1-201ENST00000364139 104 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 RNU6-805P-201ENST00000365643 106 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 Y_RNA.381-201ENST00000365666 102 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 MIR7-3-201ENST00000384898 110 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 RNU6-550P-201ENST00000391057 101 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 UBE2V1P2-201ENST00000397758 440 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 RN7SKP111-201ENST00000410349 271 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 RNU2-29P-201ENST00000410423 189 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 RNU4-46P-201ENST00000410818 138 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 RNA5SP111-201ENST00000411386 101 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 AC245291.1-201ENST00000419501 328 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 RPL7P46-201ENST00000425129 740 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms