Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SCAF1Q9H7N4 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
SCAF1Q9H7N4 AC092692.1-201ENST00000623625 2595 ntBASIC8.68□□□□□ -1.02
SCAF1Q9H7N4 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC8.68□□□□□ -1.02
SCAF1Q9H7N4 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SCAF1Q9H7N4 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
SCAF1Q9H7N4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC8.67□□□□□ -1.02
SCAF1Q9H7N4 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC8.67□□□□□ -1.02
SCAF1Q9H7N4 RNU6-497P-201ENST00000365316 104 ntBASIC8.67□□□□□ -1.02
SCAF1Q9H7N4 Y_RNA.342-201ENST00000365352 113 ntBASIC8.67□□□□□ -1.02
SCAF1Q9H7N4 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SCAF1Q9H7N4 RNA5SP187-201ENST00000384400 119 ntBASIC8.67□□□□□ -1.02
SCAF1Q9H7N4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
SCAF1Q9H7N4 RPL7AP6-201ENST00000477943 801 ntBASIC8.67□□□□□ -1.02
SCAF1Q9H7N4 RNU6-158P-201ENST00000517104 100 ntBASIC8.67□□□□□ -1.02
SCAF1Q9H7N4 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC8.67□□□□□ -1.02
SCAF1Q9H7N4 HCG18-243ENST00000602498 327 ntTSL 3 BASIC8.67□□□□□ -1.02
SCAF1Q9H7N4 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SCAF1Q9H7N4 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
SCAF1Q9H7N4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SCAF1Q9H7N4 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SCAF1Q9H7N4 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
SCAF1Q9H7N4 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SCAF1Q9H7N4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
SCAF1Q9H7N4 SNORA64.1-201ENST00000362600 132 ntBASIC8.66□□□□□ -1.02
SCAF1Q9H7N4 RNU6-1080P-201ENST00000383982 107 ntBASIC8.66□□□□□ -1.02
SCAF1Q9H7N4 AC091390.1-201ENST00000433904 331 ntBASIC8.66□□□□□ -1.02
SCAF1Q9H7N4 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
SCAF1Q9H7N4 RPSAP50-201ENST00000481955 852 ntBASIC8.66□□□□□ -1.02
SCAF1Q9H7N4 AC090958.1-201ENST00000511122 351 ntBASIC8.66□□□□□ -1.02
SCAF1Q9H7N4 AL356157.2-201ENST00000605122 111 ntBASIC8.66□□□□□ -1.02
SCAF1Q9H7N4 ARF4P1-201ENST00000605447 541 ntBASIC8.66□□□□□ -1.02
SCAF1Q9H7N4 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
SCAF1Q9H7N4 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SCAF1Q9H7N4 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SCAF1Q9H7N4 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SCAF1Q9H7N4 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC8.66□□□□□ -1.02
SCAF1Q9H7N4 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SCAF1Q9H7N4 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SCAF1Q9H7N4 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
SCAF1Q9H7N4 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SCAF1Q9H7N4 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SCAF1Q9H7N4 RNU6-1276P-201ENST00000365372 104 ntBASIC8.65□□□□□ -1.02
SCAF1Q9H7N4 U1.1-201ENST00000384101 164 ntBASIC8.65□□□□□ -1.02
SCAF1Q9H7N4 MIR223-201ENST00000385204 110 ntBASIC8.65□□□□□ -1.02
SCAF1Q9H7N4 Y_RNA.587-201ENST00000391210 103 ntBASIC8.65□□□□□ -1.02
SCAF1Q9H7N4 AL590762.2-201ENST00000395798 571 ntBASIC8.65□□□□□ -1.02
SCAF1Q9H7N4 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC8.65□□□□□ -1.02
SCAF1Q9H7N4 HCG14-201ENST00000444986 413 ntTSL 2 BASIC8.65□□□□□ -1.02
SCAF1Q9H7N4 AC016632.1-201ENST00000503994 196 ntBASIC8.65□□□□□ -1.02
SCAF1Q9H7N4 RNU6-504P-201ENST00000516568 104 ntBASIC8.65□□□□□ -1.02
SCAF1Q9H7N4 SNRPGP20-201ENST00000604477 205 ntBASIC8.65□□□□□ -1.02
SCAF1Q9H7N4 AC026951.1-201ENST00000559530 2459 ntBASIC8.65□□□□□ -1.02
SCAF1Q9H7N4 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC8.65□□□□□ -1.02
SCAF1Q9H7N4 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
SCAF1Q9H7N4 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.03
SCAF1Q9H7N4 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.03
SCAF1Q9H7N4 Z95114.1-201ENST00000624264 14574 ntBASIC8.64□□□□□ -1.03
SCAF1Q9H7N4 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC8.64□□□□□ -1.03
SCAF1Q9H7N4 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SCAF1Q9H7N4 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SCAF1Q9H7N4 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC8.64□□□□□ -1.03
SCAF1Q9H7N4 RNU6-1264P-201ENST00000383891 107 ntBASIC8.64□□□□□ -1.03
SCAF1Q9H7N4 REREP2Y-201ENST00000439103 200 ntBASIC8.64□□□□□ -1.03
SCAF1Q9H7N4 IGHV5-78-201ENST00000450948 295 ntBASIC8.64□□□□□ -1.03
SCAF1Q9H7N4 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC8.64□□□□□ -1.03
SCAF1Q9H7N4 RNA5SP290-201ENST00000517133 127 ntBASIC8.64□□□□□ -1.03
SCAF1Q9H7N4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC8.64□□□□□ -1.03
SCAF1Q9H7N4 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC8.64□□□□□ -1.03
SCAF1Q9H7N4 MIR3189-201ENST00000578735 73 ntBASIC8.64□□□□□ -1.03
SCAF1Q9H7N4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SCAF1Q9H7N4 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
SCAF1Q9H7N4 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
SCAF1Q9H7N4 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC8.64□□□□□ -1.03
SCAF1Q9H7N4 AL589743.1-201ENST00000551932 2712 ntBASIC8.64□□□□□ -1.03
SCAF1Q9H7N4 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SCAF1Q9H7N4 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC8.63□□□□□ -1.03
SCAF1Q9H7N4 RNY1P1-201ENST00000364372 112 ntBASIC8.63□□□□□ -1.03
SCAF1Q9H7N4 U3.37-201ENST00000408528 213 ntBASIC8.63□□□□□ -1.03
SCAF1Q9H7N4 RN7SKP213-201ENST00000410746 298 ntBASIC8.63□□□□□ -1.03
SCAF1Q9H7N4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC8.63□□□□□ -1.03
SCAF1Q9H7N4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC8.63□□□□□ -1.03
SCAF1Q9H7N4 RPL35AP31-201ENST00000418340 337 ntBASIC8.63□□□□□ -1.03
SCAF1Q9H7N4 AL021397.1-201ENST00000451806 248 ntBASIC8.63□□□□□ -1.03
SCAF1Q9H7N4 RPL23AP62-201ENST00000463396 453 ntBASIC8.63□□□□□ -1.03
SCAF1Q9H7N4 RNA5SP367-201ENST00000516557 118 ntBASIC8.63□□□□□ -1.03
SCAF1Q9H7N4 Y_RNA.710-201ENST00000516975 110 ntBASIC8.63□□□□□ -1.03
SCAF1Q9H7N4 IGKV1D-22-201ENST00000518953 324 ntBASIC8.63□□□□□ -1.03
SCAF1Q9H7N4 AC021006.3-201ENST00000530771 192 ntBASIC8.63□□□□□ -1.03
SCAF1Q9H7N4 AP004607.2-201ENST00000533949 322 ntBASIC8.63□□□□□ -1.03
SCAF1Q9H7N4 uc_338.26-201ENST00000612659 160 ntBASIC8.63□□□□□ -1.03
SCAF1Q9H7N4 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SCAF1Q9H7N4 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC8.63□□□□□ -1.03
SCAF1Q9H7N4 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
SCAF1Q9H7N4 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SCAF1Q9H7N4 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SCAF1Q9H7N4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC8.62□□□□□ -1.03
SCAF1Q9H7N4 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC8.62□□□□□ -1.03
SCAF1Q9H7N4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SCAF1Q9H7N4 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 200.4 ms