Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 UBBP3-201ENST00000445497 241 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.76□□□□□ -1.97
UBQLN3Q9H347 RPS15AP27-201ENST00000449183 343 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 FABP5P13-201ENST00000452144 328 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 RPL26P9-201ENST00000457466 433 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.76□□□□□ -1.97
UBQLN3Q9H347 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.76□□□□□ -1.97
UBQLN3Q9H347 AC114786.4-201ENST00000508771 728 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.76□□□□□ -1.97
UBQLN3Q9H347 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.76□□□□□ -1.97
UBQLN3Q9H347 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.76□□□□□ -1.97
UBQLN3Q9H347 RNU6-677P-201ENST00000516914 101 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 RNU6-1220P-201ENST00000517126 108 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.76□□□□□ -1.97
UBQLN3Q9H347 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.76□□□□□ -1.97
UBQLN3Q9H347 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.76□□□□□ -1.97
UBQLN3Q9H347 H3F3AP1-201ENST00000559984 334 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 MIR3167-201ENST00000579623 85 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.76□□□□□ -1.97
UBQLN3Q9H347 BNIP3P9-201ENST00000603714 553 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 AC135507.1-201ENST00000607214 561 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 AL365204.3-201ENST00000612448 685 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 ATP5A1P2-202ENST00000616464 443 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 LRRC77P-213ENST00000637727 880 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.76□□□□□ -1.97
UBQLN3Q9H347 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
UBQLN3Q9H347 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
UBQLN3Q9H347 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
UBQLN3Q9H347 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
UBQLN3Q9H347 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.75□□□□□ -1.97
UBQLN3Q9H347 RNU6-641P-201ENST00000384006 107 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 MIR23A-201ENST00000385245 73 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.75□□□□□ -1.97
UBQLN3Q9H347 MIR888-201ENST00000401186 77 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 RPL5P18-201ENST00000406671 891 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.75□□□□□ -1.97
UBQLN3Q9H347 RPL35AP12-201ENST00000425362 338 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AL358075.3-201ENST00000426289 226 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 RPL31P35-201ENST00000431058 377 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AL591212.2-201ENST00000433923 257 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AC009961.2-201ENST00000435771 251 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AL136380.1-201ENST00000447970 162 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.75□□□□□ -1.97
UBQLN3Q9H347 MRPS17P3-201ENST00000465453 385 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AC117440.1-201ENST00000474107 571 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AP004217.1-201ENST00000480579 346 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AC007182.2-201ENST00000489251 402 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 RPL39P36-201ENST00000490784 156 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AC010424.1-201ENST00000506336 297 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.75□□□□□ -1.97
UBQLN3Q9H347 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AC009812.2-201ENST00000517657 457 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.75□□□□□ -1.97
UBQLN3Q9H347 SUB1P1-201ENST00000524415 382 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AP000873.5-201ENST00000533906 236 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AC087883.1-201ENST00000551882 391 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AC064872.1-201ENST00000604823 1072 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AC019159.1-201ENST00000605094 187 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AC087752.4-201ENST00000605911 462 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AC130324.3-201ENST00000614165 542 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
UBQLN3Q9H347 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.75□□□□□ -1.97
UBQLN3Q9H347 MTND5P42-201ENST00000637720 498 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 AC026241.1-201ENST00000517873 2142 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 CR848007.1-201ENST00000442354 1699 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.75□□□□□ -1.97
UBQLN3Q9H347 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.74□□□□□ -1.97
UBQLN3Q9H347 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
UBQLN3Q9H347 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
UBQLN3Q9H347 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.74□□□□□ -1.97
UBQLN3Q9H347 OR5J1P-201ENST00000313544 939 ntBASIC2.74□□□□□ -1.97
UBQLN3Q9H347 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
UBQLN3Q9H347 SNORD56.5-201ENST00000364281 72 ntBASIC2.74□□□□□ -1.97
UBQLN3Q9H347 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
UBQLN3Q9H347 RNU6-190P-201ENST00000384154 102 ntBASIC2.74□□□□□ -1.97
UBQLN3Q9H347 RNU6-248P-201ENST00000410720 107 ntBASIC2.74□□□□□ -1.97
UBQLN3Q9H347 C1DP2-201ENST00000418167 426 ntBASIC2.74□□□□□ -1.97
UBQLN3Q9H347 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.74□□□□□ -1.97
UBQLN3Q9H347 RPS24P13-201ENST00000442520 397 ntBASIC2.74□□□□□ -1.97
UBQLN3Q9H347 WASF1P1-201ENST00000447560 1131 ntBASIC2.74□□□□□ -1.97
UBQLN3Q9H347 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.74□□□□□ -1.97
UBQLN3Q9H347 FABP5P15-201ENST00000453566 214 ntBASIC2.74□□□□□ -1.97
UBQLN3Q9H347 RPL21P41-201ENST00000459863 264 ntBASIC2.74□□□□□ -1.97
UBQLN3Q9H347 RPS3AP14-201ENST00000483907 780 ntBASIC2.74□□□□□ -1.97
UBQLN3Q9H347 AC093534.1-201ENST00000504977 132 ntBASIC2.74□□□□□ -1.97
UBQLN3Q9H347 SUMO2P6-201ENST00000505273 288 ntBASIC2.74□□□□□ -1.97
UBQLN3Q9H347 SEM1P1-201ENST00000506694 209 ntBASIC2.74□□□□□ -1.97
UBQLN3Q9H347 Y_RNA.689-201ENST00000516589 107 ntBASIC2.74□□□□□ -1.97
UBQLN3Q9H347 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms