Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 Y_RNA.674-201ENST00000516362 113 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 SNORA25.14-201ENST00000516481 132 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 RNU6-1212P-201ENST00000517023 104 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 RPL23AP87-202ENST00000573039 466 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 MIR4277-201ENST00000578298 84 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 MIR5701-3-201ENST00000578890 82 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 MIR5701-1-201ENST00000585138 82 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 AL121917.1-203ENST00000605534 577 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 MIR5701-2-201ENST00000615634 82 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 AL023881.1-201ENST00000621088 301 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 LINC01109-201ENST00000603837 3081 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 HSPA8P1-201ENST00000425843 1833 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 RAD17P1-201ENST00000418130 2042 ntBASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 AL450326.2-201ENST00000421913 1962 ntBASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 RPL9P7-201ENST00000330965 580 ntBASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 Y_RNA.27-201ENST00000362540 103 ntBASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 Y_RNA.83-201ENST00000363005 113 ntBASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 RNA5SP447-201ENST00000363749 119 ntBASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 Y_RNA.269-201ENST00000364685 89 ntBASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 U3.13-201ENST00000364804 214 ntBASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 PCNPP3-201ENST00000393579 471 ntBASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 AC063979.1-201ENST00000415539 377 ntBASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 RPL18P10-201ENST00000425606 538 ntBASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 AL159987.2-201ENST00000432754 307 ntBASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 AC011998.1-201ENST00000433403 117 ntBASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 AC090774.1-201ENST00000435925 246 ntBASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 AL513043.1-201ENST00000439124 535 ntBASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 RPL9P9-202ENST00000466501 579 ntBASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 AC008716.1-201ENST00000511084 513 ntBASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 AC134698.5-201ENST00000519444 336 ntBASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 AL356218.2-201ENST00000605264 187 ntBASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 MIR378J-201ENST00000611988 109 ntBASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 AC243829.7-201ENST00000633081 225 ntBASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 MIR4496-201ENST00000635896 61 ntBASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SSBP3Q9BWW4 AP000560.1-201ENST00000624150 1937 ntBASIC3.78□□□□□ -1.81
SSBP3Q9BWW4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 AC093535.2-201ENST00000624769 2326 ntBASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 AC139713.2-214ENST00000642059 1811 ntBASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 MTND5P9-201ENST00000503854 1755 ntBASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 RNU6-1266P-201ENST00000362794 105 ntBASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 RNU6-1159P-201ENST00000362933 107 ntBASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 RNU6-595P-201ENST00000363944 107 ntBASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 RNU6-1317P-201ENST00000364582 104 ntBASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 RNA5SP240-201ENST00000365355 128 ntBASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 Y_RNA.439-201ENST00000384119 94 ntBASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 RNU6-708P-201ENST00000384217 107 ntBASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 Y_RNA.458-201ENST00000384240 102 ntBASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 SNORD115-46-201ENST00000390982 71 ntBASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 RPL7AP25-201ENST00000423357 805 ntBASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 PPP1R11P2-201ENST00000423543 382 ntBASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 AC008065.1-201ENST00000428525 348 ntBASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 AL445305.1-201ENST00000432577 575 ntBASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 RPL29P29-201ENST00000448725 423 ntBASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 EIF4A1P11-201ENST00000451239 222 ntBASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 RPL21P126-201ENST00000470049 478 ntBASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 RPS23P5-201ENST00000495419 428 ntBASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.77□□□□□ -1.81
SSBP3Q9BWW4 AC093840.1-201ENST00000511599 336 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms