Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.51□□□□□ -2.01
RPAP1Q9BWH6 AC080128.1-201ENST00000474389 1917 ntBASIC2.51□□□□□ -2.01
RPAP1Q9BWH6 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
RPAP1Q9BWH6 Y_RNA.338-201ENST00000365320 114 ntBASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 RNU6-140P-201ENST00000384566 108 ntBASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 RNU6-906P-201ENST00000384700 70 ntBASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 AL513331.1-201ENST00000411908 397 ntBASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 AL451054.2-201ENST00000420896 202 ntBASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 Z82209.1-201ENST00000422141 2135 ntBASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 AP000542.1-201ENST00000448473 371 ntBASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 AC011753.1-201ENST00000451001 220 ntBASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 AC087588.1-201ENST00000462203 316 ntBASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 RPL31P41-201ENST00000477967 372 ntBASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 AC034222.1-201ENST00000494052 532 ntBASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 HMGB3P3-201ENST00000510526 400 ntBASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 AC010546.1-201ENST00000569391 485 ntBASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 MIR3908-201ENST00000579798 126 ntBASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 AF038458.1-201ENST00000588406 262 ntBASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 AC002545.1-201ENST00000592511 181 ntBASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 RNU6-88P-201ENST00000606801 100 ntBASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 YWHAEP7-203ENST00000622054 312 ntBASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.5□□□□□ -2.01
RPAP1Q9BWH6 RNA5SP37-201ENST00000365420 130 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 MIR767-201ENST00000390228 109 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 RNU2-33P-201ENST00000410344 192 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 RNU6-1140P-201ENST00000410517 106 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 ZNF863P-201ENST00000426746 417 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 AL117351.1-201ENST00000438864 766 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 AC009296.1-201ENST00000443146 155 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 TPT1P14-201ENST00000448018 505 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 AL021397.1-201ENST00000451806 248 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 RNA5SP216-201ENST00000516111 123 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 RN7SKP40-201ENST00000517211 242 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 AL391261.3-201ENST00000557194 520 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 MTCO2P2-201ENST00000591258 225 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 AL158042.1-201ENST00000605338 460 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 FTX_3.1-201ENST00000610451 147 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 AC135776.4-201ENST00000624300 1904 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 SNORA4.1-201ENST00000364263 144 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 RNA5SP138-201ENST00000365098 114 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 RN7SKP266-201ENST00000410232 287 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 ELOCP9-201ENST00000418624 239 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 AC106883.1-201ENST00000418805 562 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 AC084290.1-201ENST00000434995 374 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 AC004854.1-201ENST00000440356 349 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 FGF7P5-201ENST00000441829 291 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 RPS15AP27-201ENST00000449183 343 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 RPL38P4-201ENST00000502376 214 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 AC093809.1-201ENST00000509155 340 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 MTCYBP43-201ENST00000513621 740 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 HMGN2P15-201ENST00000585707 270 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 AP000484.1-201ENST00000620067 1252 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 AP000676.3-201ENST00000623299 569 ntBASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
RPAP1Q9BWH6 MTND4P35-201ENST00000604257 1375 ntBASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 CR848007.1-201ENST00000442354 1699 ntBASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms