Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 RPL30P4-201ENST00000429309 333 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 Z98742.2-201ENST00000431564 187 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 AC010153.1-201ENST00000432862 727 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.52□□□□□ -2.17
UPK3BQ9BT76 AC020550.1-201ENST00000447385 163 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.52□□□□□ -2.17
UPK3BQ9BT76 AL513124.1-201ENST00000450410 614 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.52□□□□□ -2.17
UPK3BQ9BT76 KLF3P2-201ENST00000465138 268 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 AC010631.1-201ENST00000474150 156 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.52□□□□□ -2.17
UPK3BQ9BT76 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
UPK3BQ9BT76 SCARNA16.3-201ENST00000516595 184 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.52□□□□□ -2.17
UPK3BQ9BT76 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
UPK3BQ9BT76 AC023538.1-201ENST00000534576 736 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 AC093012.1-202ENST00000549403 582 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.52□□□□□ -2.17
UPK3BQ9BT76 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.52□□□□□ -2.17
UPK3BQ9BT76 AL133241.1-201ENST00000556832 487 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.52□□□□□ -2.17
UPK3BQ9BT76 AC060771.1-201ENST00000582031 164 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 RPP40P2-201ENST00000603596 712 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 AL355598.1-201ENST00000604169 202 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.52□□□□□ -2.17
UPK3BQ9BT76 AC091932.3-201ENST00000624223 323 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 AC093591.3-201ENST00000634516 308 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.52□□□□□ -2.17
UPK3BQ9BT76 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.52□□□□□ -2.17
UPK3BQ9BT76 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.52□□□□□ -2.17
UPK3BQ9BT76 ZNF355P-201ENST00000427301 3216 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
UPK3BQ9BT76 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
UPK3BQ9BT76 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.51□□□□□ -2.17
UPK3BQ9BT76 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
UPK3BQ9BT76 AL354685.2-201ENST00000448218 1447 ntBASIC1.51□□□□□ -2.17
UPK3BQ9BT76 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
UPK3BQ9BT76 SNORA46.1-201ENST00000391069 153 ntBASIC1.51□□□□□ -2.17
UPK3BQ9BT76 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.51□□□□□ -2.17
UPK3BQ9BT76 RPL21P24-201ENST00000413752 448 ntBASIC1.51□□□□□ -2.17
UPK3BQ9BT76 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.51□□□□□ -2.17
UPK3BQ9BT76 AC003685.2-201ENST00000422795 395 ntBASIC1.51□□□□□ -2.17
UPK3BQ9BT76 RPS3AP44-201ENST00000425466 790 ntBASIC1.51□□□□□ -2.17
UPK3BQ9BT76 AC244035.1-201ENST00000430042 390 ntBASIC1.51□□□□□ -2.17
UPK3BQ9BT76 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.51□□□□□ -2.17
UPK3BQ9BT76 GPM6BP2-201ENST00000432046 144 ntBASIC1.51□□□□□ -2.17
UPK3BQ9BT76 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.51□□□□□ -2.17
UPK3BQ9BT76 AL161651.1-201ENST00000440882 223 ntBASIC1.51□□□□□ -2.17
UPK3BQ9BT76 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.51□□□□□ -2.17
UPK3BQ9BT76 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.51□□□□□ -2.17
UPK3BQ9BT76 GPM6BP1-201ENST00000446387 144 ntBASIC1.51□□□□□ -2.17
UPK3BQ9BT76 TPT1P14-201ENST00000448018 505 ntBASIC1.51□□□□□ -2.17
UPK3BQ9BT76 HMGN2P10-201ENST00000448085 265 ntBASIC1.51□□□□□ -2.17
UPK3BQ9BT76 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.51□□□□□ -2.17
UPK3BQ9BT76 MTND1P16-201ENST00000465177 898 ntBASIC1.51□□□□□ -2.17
UPK3BQ9BT76 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.51□□□□□ -2.17
UPK3BQ9BT76 AC004263.1-201ENST00000479327 332 ntBASIC1.51□□□□□ -2.17
UPK3BQ9BT76 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.51□□□□□ -2.17
UPK3BQ9BT76 RPS29P21-201ENST00000496272 170 ntBASIC1.51□□□□□ -2.17
UPK3BQ9BT76 AC026801.1-201ENST00000497178 464 ntBASIC1.51□□□□□ -2.17
UPK3BQ9BT76 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.51□□□□□ -2.17
UPK3BQ9BT76 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.51□□□□□ -2.17
UPK3BQ9BT76 AC093809.1-201ENST00000509155 340 ntBASIC1.51□□□□□ -2.17
UPK3BQ9BT76 RNA5SP364-201ENST00000516938 78 ntBASIC1.51□□□□□ -2.17
UPK3BQ9BT76 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
UPK3BQ9BT76 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.51□□□□□ -2.17
UPK3BQ9BT76 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.51□□□□□ -2.17
UPK3BQ9BT76 AC105245.1-201ENST00000581934 244 ntBASIC1.51□□□□□ -2.17
UPK3BQ9BT76 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.51□□□□□ -2.17
UPK3BQ9BT76 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.51□□□□□ -2.17
UPK3BQ9BT76 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.51□□□□□ -2.17
UPK3BQ9BT76 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.51□□□□□ -2.17
UPK3BQ9BT76 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.51□□□□□ -2.17
UPK3BQ9BT76 AC107214.2-201ENST00000608204 634 ntBASIC1.51□□□□□ -2.17
UPK3BQ9BT76 DUSP12P1-201ENST00000612874 516 ntBASIC1.51□□□□□ -2.17
UPK3BQ9BT76 AL136981.2-201ENST00000617319 734 ntBASIC1.51□□□□□ -2.17
UPK3BQ9BT76 MIR219B-201ENST00000637023 88 ntBASIC1.51□□□□□ -2.17
UPK3BQ9BT76 AL359854.1-201ENST00000614203 1594 ntBASIC1.51□□□□□ -2.17
UPK3BQ9BT76 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
UPK3BQ9BT76 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
UPK3BQ9BT76 RNU6-486P-201ENST00000363116 107 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 RNU6-853P-201ENST00000364306 107 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 SNORA16B-201ENST00000364674 135 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 Y_RNA.311-201ENST00000365068 96 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 RNU6-19P-201ENST00000384718 107 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 MIR147B-201ENST00000390185 80 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 SNORA11.4-201ENST00000408823 129 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.5□□□□□ -2.17
UPK3BQ9BT76 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 AL353729.1-201ENST00000425044 720 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 AL121890.1-201ENST00000435457 205 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.5□□□□□ -2.17
UPK3BQ9BT76 ELOCP30-201ENST00000447108 299 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 RNU6-717P-201ENST00000459076 104 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 RNA5SP233-201ENST00000459153 113 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.5□□□□□ -2.17
UPK3BQ9BT76 AC068781.1-201ENST00000488231 618 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 RPL9P6-201ENST00000492764 598 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms