Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AL160314.1-201ENST00000490836 438 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 HMGB1P35-201ENST00000503360 598 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 Y_RNA.675-201ENST00000516389 149 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 SNORA25.15-201ENST00000516487 89 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.98□□□□□ -2.25
LIMD2Q9BT23 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC0.98□□□□□ -2.25
LIMD2Q9BT23 AP000916.1-201ENST00000533869 835 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
LIMD2Q9BT23 AC104581.2-201ENST00000572227 430 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.98□□□□□ -2.25
LIMD2Q9BT23 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
LIMD2Q9BT23 AC124283.4-201ENST00000581815 456 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 AL031274.2-201ENST00000599419 203 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC0.98□□□□□ -2.25
LIMD2Q9BT23 AC104763.2-201ENST00000604179 382 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.98□□□□□ -2.25
LIMD2Q9BT23 AC016911.1-201ENST00000613297 452 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 AC091834.1-201ENST00000614543 472 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 AC091304.6-201ENST00000619761 202 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.98□□□□□ -2.25
LIMD2Q9BT23 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.98□□□□□ -2.25
LIMD2Q9BT23 AC007490.1-201ENST00000624321 703 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 HPVC1-201ENST00000629899 1198 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.98□□□□□ -2.25
LIMD2Q9BT23 AC005539.1-201ENST00000443768 1479 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 RNU6-492P-201ENST00000363035 104 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 RPL26P27-201ENST00000414397 437 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 BTF3P8-201ENST00000414577 526 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.97□□□□□ -2.25
LIMD2Q9BT23 RPL23AP39-201ENST00000415533 405 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 MTATP6P27-201ENST00000416987 621 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 AL451054.2-201ENST00000420896 202 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 MTCO3P1-205ENST00000422088 832 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 AC246680.2-201ENST00000422106 389 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 AC244035.1-201ENST00000430042 390 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 RPL7P34-201ENST00000433316 712 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.97□□□□□ -2.25
LIMD2Q9BT23 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC0.97□□□□□ -2.25
LIMD2Q9BT23 AC118469.1-201ENST00000442943 488 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 RNFT1P2-201ENST00000443064 757 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 MTCYBP11-201ENST00000447254 1109 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 SNORD121B-201ENST00000458838 81 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.97□□□□□ -2.25
LIMD2Q9BT23 AC023790.1-201ENST00000482174 347 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 AC091860.1-201ENST00000505723 432 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC0.97□□□□□ -2.25
LIMD2Q9BT23 AC010460.2-201ENST00000509054 677 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC0.97□□□□□ -2.25
LIMD2Q9BT23 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.97□□□□□ -2.25
LIMD2Q9BT23 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC0.97□□□□□ -2.25
LIMD2Q9BT23 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC0.97□□□□□ -2.25
LIMD2Q9BT23 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.97□□□□□ -2.25
LIMD2Q9BT23 ARL2BPP2-201ENST00000550907 489 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 AC005951.2-201ENST00000576282 495 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.97□□□□□ -2.25
LIMD2Q9BT23 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
LIMD2Q9BT23 BNIP3P25-201ENST00000596023 559 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC0.97□□□□□ -2.25
LIMD2Q9BT23 SNRPGP19-201ENST00000603826 189 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 AC011451.2-201ENST00000604303 598 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 BX248123.2-201ENST00000606318 124 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 AL158211.4-201ENST00000606988 584 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 AF129408.1-201ENST00000608767 431 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 AC013412.1-201ENST00000610687 192 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 TP73-AS1.1-201ENST00000611447 161 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 AC022202.1-201ENST00000613515 211 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 VN1R9P-201ENST00000614184 867 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 AL161722.3-201ENST00000605789 2983 ntBASIC0.97□□□□□ -2.25
LIMD2Q9BT23 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
LIMD2Q9BT23 RNU6-1066P-201ENST00000363573 105 ntBASIC0.96□□□□□ -2.26
LIMD2Q9BT23 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
LIMD2Q9BT23 MIR9-3-201ENST00000385084 90 ntBASIC0.96□□□□□ -2.26
LIMD2Q9BT23 MIR561-201ENST00000385216 97 ntBASIC0.96□□□□□ -2.26
LIMD2Q9BT23 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
LIMD2Q9BT23 SNORA40.18-201ENST00000391200 128 ntBASIC0.96□□□□□ -2.26
LIMD2Q9BT23 RN7SKP101-201ENST00000411376 320 ntBASIC0.96□□□□□ -2.26
LIMD2Q9BT23 POLHP1-201ENST00000411806 470 ntBASIC0.96□□□□□ -2.26
LIMD2Q9BT23 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC0.96□□□□□ -2.26
LIMD2Q9BT23 AL121882.1-201ENST00000422893 417 ntBASIC0.96□□□□□ -2.26
LIMD2Q9BT23 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.96□□□□□ -2.26
LIMD2Q9BT23 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.96□□□□□ -2.26
LIMD2Q9BT23 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.96□□□□□ -2.26
LIMD2Q9BT23 NANOGP2-201ENST00000435391 727 ntBASIC0.96□□□□□ -2.26
LIMD2Q9BT23 RSU1P2-202ENST00000437884 485 ntBASIC0.96□□□□□ -2.26
LIMD2Q9BT23 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.96□□□□□ -2.26
LIMD2Q9BT23 AC026410.2-201ENST00000460281 156 ntBASIC0.96□□□□□ -2.26
LIMD2Q9BT23 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.96□□□□□ -2.26
LIMD2Q9BT23 AC092902.1-201ENST00000486999 259 ntBASIC0.96□□□□□ -2.26
LIMD2Q9BT23 RPL22P13-201ENST00000493291 347 ntBASIC0.96□□□□□ -2.26
LIMD2Q9BT23 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.96□□□□□ -2.26
LIMD2Q9BT23 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.96□□□□□ -2.26
LIMD2Q9BT23 RNU6-295P-201ENST00000516901 104 ntBASIC0.96□□□□□ -2.26
LIMD2Q9BT23 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.96□□□□□ -2.26
LIMD2Q9BT23 AC034114.1-201ENST00000520293 285 ntBASIC0.96□□□□□ -2.26
LIMD2Q9BT23 AC084851.1-201ENST00000529105 249 ntBASIC0.96□□□□□ -2.26
LIMD2Q9BT23 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.96□□□□□ -2.26
LIMD2Q9BT23 NDUFA5P6-201ENST00000542110 379 ntBASIC0.96□□□□□ -2.26
LIMD2Q9BT23 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.96□□□□□ -2.26
LIMD2Q9BT23 MIR3198-2-201ENST00000577868 80 ntBASIC0.96□□□□□ -2.26
LIMD2Q9BT23 SNORD53B-201ENST00000577887 78 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms