Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 OOSP1P1-201ENST00000423265 274 ntBASIC2.37□□□□□ -2.03
NPAS2Q99743 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.37□□□□□ -2.03
NPAS2Q99743 SUMO1P4-201ENST00000429430 302 ntBASIC2.37□□□□□ -2.03
NPAS2Q99743 MYL8P-204ENST00000431574 518 ntBASIC2.37□□□□□ -2.03
NPAS2Q99743 GPM6BP2-201ENST00000432046 144 ntBASIC2.37□□□□□ -2.03
NPAS2Q99743 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.37□□□□□ -2.03
NPAS2Q99743 MTND1P32-201ENST00000433043 938 ntBASIC2.37□□□□□ -2.03
NPAS2Q99743 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.37□□□□□ -2.03
NPAS2Q99743 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.37□□□□□ -2.03
NPAS2Q99743 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.37□□□□□ -2.03
NPAS2Q99743 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.37□□□□□ -2.03
NPAS2Q99743 GPM6BP1-201ENST00000446387 144 ntBASIC2.37□□□□□ -2.03
NPAS2Q99743 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.37□□□□□ -2.03
NPAS2Q99743 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.37□□□□□ -2.03
NPAS2Q99743 EEF1B2P7-201ENST00000451177 676 ntBASIC2.37□□□□□ -2.03
NPAS2Q99743 RPL23AP35-201ENST00000451906 501 ntBASIC2.37□□□□□ -2.03
NPAS2Q99743 MTATP6P7-201ENST00000453315 681 ntBASIC2.37□□□□□ -2.03
NPAS2Q99743 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.37□□□□□ -2.03
NPAS2Q99743 HSPE1P23-201ENST00000509838 286 ntBASIC2.37□□□□□ -2.03
NPAS2Q99743 SNORA31.3-201ENST00000516029 96 ntBASIC2.37□□□□□ -2.03
NPAS2Q99743 RNU6-64P-201ENST00000517119 105 ntBASIC2.37□□□□□ -2.03
NPAS2Q99743 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.37□□□□□ -2.03
NPAS2Q99743 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.37□□□□□ -2.03
NPAS2Q99743 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.37□□□□□ -2.03
NPAS2Q99743 AL512310.1-201ENST00000548639 172 ntBASIC2.37□□□□□ -2.03
NPAS2Q99743 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.37□□□□□ -2.03
NPAS2Q99743 AC024619.4-201ENST00000580924 316 ntBASIC2.37□□□□□ -2.03
NPAS2Q99743 MIR4435-1-201ENST00000582552 80 ntBASIC2.37□□□□□ -2.03
NPAS2Q99743 MIR4293-201ENST00000584305 78 ntBASIC2.37□□□□□ -2.03
NPAS2Q99743 DPPA3P3-201ENST00000603842 430 ntBASIC2.37□□□□□ -2.03
NPAS2Q99743 HMGB1P24-202ENST00000615653 685 ntBASIC2.37□□□□□ -2.03
NPAS2Q99743 FO624990.1-201ENST00000636373 85 ntBASIC2.37□□□□□ -2.03
NPAS2Q99743 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
NPAS2Q99743 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.37□□□□□ -2.03
NPAS2Q99743 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NPAS2Q99743 RNA5SP393-201ENST00000363423 117 ntBASIC2.36□□□□□ -2.03
NPAS2Q99743 RNA5SP456-201ENST00000364002 114 ntBASIC2.36□□□□□ -2.03
NPAS2Q99743 RNU5A-8P-201ENST00000364102 114 ntBASIC2.36□□□□□ -2.03
NPAS2Q99743 RNU6-769P-201ENST00000384407 104 ntBASIC2.36□□□□□ -2.03
NPAS2Q99743 RPS24P7-201ENST00000416921 246 ntBASIC2.36□□□□□ -2.03
NPAS2Q99743 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.36□□□□□ -2.03
NPAS2Q99743 AL591719.1-201ENST00000444669 744 ntBASIC2.36□□□□□ -2.03
NPAS2Q99743 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.36□□□□□ -2.03
NPAS2Q99743 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.36□□□□□ -2.03
NPAS2Q99743 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
NPAS2Q99743 AC034244.1-201ENST00000507687 207 ntBASIC2.36□□□□□ -2.03
NPAS2Q99743 AC112673.1-201ENST00000513168 575 ntBASIC2.36□□□□□ -2.03
NPAS2Q99743 RNU5A-4P-201ENST00000516588 111 ntBASIC2.36□□□□□ -2.03
NPAS2Q99743 RNU1-104P-201ENST00000517280 175 ntBASIC2.36□□□□□ -2.03
NPAS2Q99743 BTF3P12-201ENST00000519620 469 ntBASIC2.36□□□□□ -2.03
NPAS2Q99743 AP003467.2-201ENST00000520175 319 ntBASIC2.36□□□□□ -2.03
NPAS2Q99743 RPL7P20-201ENST00000520308 745 ntBASIC2.36□□□□□ -2.03
NPAS2Q99743 EEF1A1P37-201ENST00000522748 715 ntBASIC2.36□□□□□ -2.03
NPAS2Q99743 DEFB108A-201ENST00000530110 222 ntBASIC2.36□□□□□ -2.03
NPAS2Q99743 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NPAS2Q99743 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.36□□□□□ -2.03
NPAS2Q99743 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.36□□□□□ -2.03
NPAS2Q99743 AC135628.1-201ENST00000568867 534 ntBASIC2.36□□□□□ -2.03
NPAS2Q99743 MIR544B-201ENST00000582372 78 ntBASIC2.36□□□□□ -2.03
NPAS2Q99743 MIR4658-201ENST00000584344 65 ntBASIC2.36□□□□□ -2.03
NPAS2Q99743 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.36□□□□□ -2.03
NPAS2Q99743 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.36□□□□□ -2.03
NPAS2Q99743 AC025588.2-201ENST00000604851 466 ntBASIC2.36□□□□□ -2.03
NPAS2Q99743 BCRP9-201ENST00000605312 388 ntBASIC2.36□□□□□ -2.03
NPAS2Q99743 TUSC7.1-201ENST00000610969 165 ntBASIC2.36□□□□□ -2.03
NPAS2Q99743 AP002782.1-201ENST00000623107 614 ntBASIC2.36□□□□□ -2.03
NPAS2Q99743 AL356596.1-201ENST00000624230 379 ntBASIC2.36□□□□□ -2.03
NPAS2Q99743 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.36□□□□□ -2.03
NPAS2Q99743 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
NPAS2Q99743 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NPAS2Q99743 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NPAS2Q99743 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.35□□□□□ -2.03
NPAS2Q99743 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
NPAS2Q99743 AP000568.1-201ENST00000282964 442 ntBASIC2.35□□□□□ -2.03
NPAS2Q99743 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NPAS2Q99743 RPL21P132-201ENST00000331267 462 ntBASIC2.35□□□□□ -2.03
NPAS2Q99743 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
NPAS2Q99743 RNU6-931P-201ENST00000363850 107 ntBASIC2.35□□□□□ -2.03
NPAS2Q99743 RNU4-28P-201ENST00000364739 141 ntBASIC2.35□□□□□ -2.03
NPAS2Q99743 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.35□□□□□ -2.03
NPAS2Q99743 MIR27B-201ENST00000385129 97 ntBASIC2.35□□□□□ -2.03
NPAS2Q99743 RNU6-220P-201ENST00000390919 107 ntBASIC2.35□□□□□ -2.03
NPAS2Q99743 RSL24D1P4-201ENST00000400938 484 ntBASIC2.35□□□□□ -2.03
NPAS2Q99743 U3.37-201ENST00000408528 213 ntBASIC2.35□□□□□ -2.03
NPAS2Q99743 AC007064.1-201ENST00000412238 351 ntBASIC2.35□□□□□ -2.03
NPAS2Q99743 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.35□□□□□ -2.03
NPAS2Q99743 HIGD1AP15-201ENST00000416198 280 ntBASIC2.35□□□□□ -2.03
NPAS2Q99743 MTCO2P21-201ENST00000419780 677 ntBASIC2.35□□□□□ -2.03
NPAS2Q99743 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.35□□□□□ -2.03
NPAS2Q99743 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.35□□□□□ -2.03
NPAS2Q99743 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.35□□□□□ -2.03
NPAS2Q99743 AL035407.1-201ENST00000429211 571 ntBASIC2.35□□□□□ -2.03
NPAS2Q99743 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NPAS2Q99743 LARP1BP3-201ENST00000437229 869 ntBASIC2.35□□□□□ -2.03
NPAS2Q99743 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.35□□□□□ -2.03
NPAS2Q99743 HMGN2P10-201ENST00000448085 265 ntBASIC2.35□□□□□ -2.03
NPAS2Q99743 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.35□□□□□ -2.03
NPAS2Q99743 AC108059.3-201ENST00000456388 214 ntBASIC2.35□□□□□ -2.03
NPAS2Q99743 RBM43P1-201ENST00000476891 1081 ntBASIC2.35□□□□□ -2.03
NPAS2Q99743 RPF2P2-201ENST00000504693 896 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms