Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 HSPE1P20-201ENST00000538133 289 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 AL160290.3-201ENST00000604869 165 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 AC004805.2-201ENST00000605382 482 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 AC012442.3-202ENST00000636742 206 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 AC010615.1-201ENST00000594254 1764 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 AC116667.1-201ENST00000604855 2072 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 RNA5SP307-201ENST00000362863 116 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 RNA5SP513-201ENST00000364648 118 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 Y_RNA.350-201ENST00000365409 98 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 Y_RNA.500-201ENST00000384466 111 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 RNU6-146P-201ENST00000384602 108 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 RNU6-178P-201ENST00000384631 104 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 MIR135A2-201ENST00000384854 100 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 SNORD73A-201ENST00000386062 65 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 PTMAP5-201ENST00000393073 333 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 AL590704.1-201ENST00000402856 794 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 RNA5SP36-201ENST00000410197 133 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 RPS11P1-201ENST00000451072 473 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 PPIAP15-201ENST00000479662 484 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 AC011005.2-201ENST00000487324 359 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 RPL17P19-201ENST00000489069 552 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 HMGB1P35-201ENST00000503360 598 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 AC110768.1-201ENST00000509222 400 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 Y_RNA.680-201ENST00000516441 93 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 AC007991.1-201ENST00000522680 631 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 AP003385.6-201ENST00000531603 374 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 MIR5692A1-201ENST00000580523 69 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 MIR3128-201ENST00000581957 66 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 AC016727.2-201ENST00000603988 621 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 HMGN2P28-201ENST00000606102 262 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 CR392039.5-201ENST00000623201 510 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 AL450326.2-201ENST00000421913 1962 ntBASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.88□□□□□ -1.63
SYNGAP1Q96PV0 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 AL445529.1-201ENST00000398713 389 ntBASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 RNU6-1156P-201ENST00000410365 100 ntBASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 AC108032.1-201ENST00000416706 207 ntBASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 SSXP9-201ENST00000417503 292 ntBASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 SYF2P2-201ENST00000417620 583 ntBASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 RPL7P2-201ENST00000427639 268 ntBASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 RPL23AP25-201ENST00000430973 463 ntBASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 HMGB1P27-201ENST00000431429 603 ntBASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 GOT2P5-201ENST00000433995 546 ntBASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 RPL23AP81-201ENST00000455252 467 ntBASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 RPL23AP31-201ENST00000456160 467 ntBASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 RPL35AP15-201ENST00000468042 339 ntBASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 RNU1-103P-201ENST00000516502 125 ntBASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 AC090151.1-201ENST00000520784 730 ntBASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 OR4H12P-201ENST00000556269 907 ntBASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 SUB1P3-201ENST00000564581 315 ntBASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 AC067852.3-201ENST00000589177 561 ntBASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 OR1M4P-201ENST00000589199 287 ntBASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 AC019176.2-201ENST00000611579 315 ntBASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 AC012314.7-201ENST00000619693 93 ntBASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 AC007546.2-201ENST00000623996 360 ntBASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SYNGAP1Q96PV0 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 AC233263.6-201ENST00000631132 1963 ntBASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 RNA5SP130-201ENST00000364431 114 ntBASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 SNORA20.1-201ENST00000364790 130 ntBASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 RNU6-1329P-201ENST00000365664 107 ntBASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 Y_RNA.480-201ENST00000384364 102 ntBASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 Y_RNA.515-201ENST00000384535 112 ntBASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 MIR34B-201ENST00000385076 84 ntBASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 RPS15AP6-201ENST00000420703 385 ntBASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 PGBD4P6-201ENST00000421501 610 ntBASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 AL162151.2-201ENST00000448875 158 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms