Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 UBE2L4-201ENST00000587688 464 ntBASIC2.1□□□□□ -2.07
COL21A1Q96P44 AL158827.2-201ENST00000602494 330 ntBASIC2.1□□□□□ -2.07
COL21A1Q96P44 RPP40P2-201ENST00000603596 712 ntBASIC2.1□□□□□ -2.07
COL21A1Q96P44 AL121917.1-203ENST00000605534 577 ntBASIC2.1□□□□□ -2.07
COL21A1Q96P44 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.1□□□□□ -2.07
COL21A1Q96P44 AC072039.2-201ENST00000608883 439 ntBASIC2.1□□□□□ -2.07
COL21A1Q96P44 AP000240.1-201ENST00000609910 452 ntBASIC2.1□□□□□ -2.07
COL21A1Q96P44 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.1□□□□□ -2.07
COL21A1Q96P44 AL158801.5-201ENST00000623123 465 ntBASIC2.1□□□□□ -2.07
COL21A1Q96P44 AC010608.3-201ENST00000625048 527 ntBASIC2.1□□□□□ -2.07
COL21A1Q96P44 AL691447.3-201ENST00000635020 330 ntBASIC2.1□□□□□ -2.07
COL21A1Q96P44 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.1□□□□□ -2.07
COL21A1Q96P44 MIR7157-201ENST00000635801 60 ntBASIC2.1□□□□□ -2.07
COL21A1Q96P44 MIR7515-201ENST00000637837 67 ntBASIC2.1□□□□□ -2.07
COL21A1Q96P44 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.1□□□□□ -2.07
COL21A1Q96P44 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
COL21A1Q96P44 RNY4P24-201ENST00000362735 96 ntBASIC2.09□□□□□ -2.07
COL21A1Q96P44 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
COL21A1Q96P44 AL359704.1-201ENST00000411586 781 ntBASIC2.09□□□□□ -2.07
COL21A1Q96P44 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.09□□□□□ -2.07
COL21A1Q96P44 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
COL21A1Q96P44 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.09□□□□□ -2.07
COL21A1Q96P44 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.09□□□□□ -2.07
COL21A1Q96P44 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.09□□□□□ -2.07
COL21A1Q96P44 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.09□□□□□ -2.07
COL21A1Q96P44 AC018634.1-201ENST00000437554 401 ntBASIC2.09□□□□□ -2.07
COL21A1Q96P44 RSU1P2-202ENST00000437884 485 ntBASIC2.09□□□□□ -2.07
COL21A1Q96P44 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.09□□□□□ -2.07
COL21A1Q96P44 EXOSC3P1-201ENST00000448649 500 ntBASIC2.09□□□□□ -2.07
COL21A1Q96P44 RPL12P25-201ENST00000455592 494 ntBASIC2.09□□□□□ -2.07
COL21A1Q96P44 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.09□□□□□ -2.07
COL21A1Q96P44 RPL23AP49-201ENST00000492925 468 ntBASIC2.09□□□□□ -2.07
COL21A1Q96P44 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.09□□□□□ -2.07
COL21A1Q96P44 AC105252.1-201ENST00000503089 286 ntBASIC2.09□□□□□ -2.07
COL21A1Q96P44 AC093281.2-201ENST00000510153 597 ntBASIC2.09□□□□□ -2.07
COL21A1Q96P44 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.09□□□□□ -2.07
COL21A1Q96P44 RNU6-390P-201ENST00000516259 103 ntBASIC2.09□□□□□ -2.07
COL21A1Q96P44 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.09□□□□□ -2.07
COL21A1Q96P44 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.09□□□□□ -2.07
COL21A1Q96P44 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
COL21A1Q96P44 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.09□□□□□ -2.07
COL21A1Q96P44 AL512310.1-201ENST00000548639 172 ntBASIC2.09□□□□□ -2.07
COL21A1Q96P44 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.09□□□□□ -2.07
COL21A1Q96P44 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.09□□□□□ -2.07
COL21A1Q96P44 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.09□□□□□ -2.07
COL21A1Q96P44 AL121652.1-201ENST00000608851 448 ntBASIC2.09□□□□□ -2.07
COL21A1Q96P44 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.09□□□□□ -2.07
COL21A1Q96P44 AC064859.1-201ENST00000624741 174 ntBASIC2.09□□□□□ -2.07
COL21A1Q96P44 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.09□□□□□ -2.07
COL21A1Q96P44 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
COL21A1Q96P44 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.09□□□□□ -2.07
COL21A1Q96P44 AC006020.1-201ENST00000420179 1854 ntBASIC2.09□□□□□ -2.08
COL21A1Q96P44 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
COL21A1Q96P44 MTND5P33-201ENST00000571250 1450 ntBASIC2.08□□□□□ -2.08
COL21A1Q96P44 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL21A1Q96P44 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL21A1Q96P44 RNU6-1284P-201ENST00000363701 100 ntBASIC2.08□□□□□ -2.08
COL21A1Q96P44 RNU1-91P-201ENST00000364746 163 ntBASIC2.08□□□□□ -2.08
COL21A1Q96P44 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
COL21A1Q96P44 RNU1-73P-201ENST00000383971 164 ntBASIC2.08□□□□□ -2.08
COL21A1Q96P44 RNU6-636P-201ENST00000384598 107 ntBASIC2.08□□□□□ -2.08
COL21A1Q96P44 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.08□□□□□ -2.08
COL21A1Q96P44 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.08□□□□□ -2.08
COL21A1Q96P44 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.08□□□□□ -2.08
COL21A1Q96P44 MTND1P28-201ENST00000435623 950 ntBASIC2.08□□□□□ -2.08
COL21A1Q96P44 COX6CP12-201ENST00000446748 202 ntBASIC2.08□□□□□ -2.08
COL21A1Q96P44 snoU13.23-201ENST00000458863 104 ntBASIC2.08□□□□□ -2.08
COL21A1Q96P44 snoU13.15-201ENST00000459407 104 ntBASIC2.08□□□□□ -2.08
COL21A1Q96P44 AC004263.1-201ENST00000479327 332 ntBASIC2.08□□□□□ -2.08
COL21A1Q96P44 AC090096.1-201ENST00000489168 390 ntBASIC2.08□□□□□ -2.08
COL21A1Q96P44 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.08□□□□□ -2.08
COL21A1Q96P44 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.08□□□□□ -2.08
COL21A1Q96P44 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.08□□□□□ -2.08
COL21A1Q96P44 AC009063.1-201ENST00000563342 702 ntBASIC2.08□□□□□ -2.08
COL21A1Q96P44 SNORD53-201ENST00000579969 78 ntBASIC2.08□□□□□ -2.08
COL21A1Q96P44 AC091057.3-201ENST00000602684 733 ntBASIC2.08□□□□□ -2.08
COL21A1Q96P44 MTND3P19-201ENST00000603825 345 ntBASIC2.08□□□□□ -2.08
COL21A1Q96P44 MTND4LP5-201ENST00000605152 292 ntBASIC2.08□□□□□ -2.08
COL21A1Q96P44 AC007038.2-201ENST00000608095 740 ntBASIC2.08□□□□□ -2.08
COL21A1Q96P44 AC007349.4-201ENST00000608114 532 ntBASIC2.08□□□□□ -2.08
COL21A1Q96P44 AC025594.3-201ENST00000613068 790 ntBASIC2.08□□□□□ -2.08
COL21A1Q96P44 AC079416.3-201ENST00000624479 549 ntBASIC2.08□□□□□ -2.08
COL21A1Q96P44 U2.21-201ENST00000637295 81 ntBASIC2.08□□□□□ -2.08
COL21A1Q96P44 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.08□□□□□ -2.08
COL21A1Q96P44 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL21A1Q96P44 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.08□□□□□ -2.08
COL21A1Q96P44 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL21A1Q96P44 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
COL21A1Q96P44 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.07□□□□□ -2.08
COL21A1Q96P44 RNU6-1167P-201ENST00000363227 94 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 SNORA4.1-201ENST00000364263 144 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 RNU6-777P-201ENST00000364265 104 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COL21A1Q96P44 BTF3P7-201ENST00000407097 488 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.07□□□□□ -2.08
COL21A1Q96P44 AL135786.1-201ENST00000415892 214 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.07□□□□□ -2.08
COL21A1Q96P44 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.07□□□□□ -2.08
COL21A1Q96P44 AC092648.1-201ENST00000425870 423 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 ISCA1P6-201ENST00000427740 390 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms