Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS50Q96JG6 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.61□□□□□ -1.83
VPS50Q96JG6 AL359314.1-201ENST00000616913 261 ntBASIC3.61□□□□□ -1.83
VPS50Q96JG6 uc_338.34-201ENST00000617467 174 ntBASIC3.61□□□□□ -1.83
VPS50Q96JG6 SNORA50A-202ENST00000629536 136 ntBASIC3.61□□□□□ -1.83
VPS50Q96JG6 MTND5P42-201ENST00000637720 498 ntBASIC3.61□□□□□ -1.83
VPS50Q96JG6 AC103710.2-202ENST00000641454 2853 ntBASIC3.61□□□□□ -1.83
VPS50Q96JG6 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS50Q96JG6 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS50Q96JG6 TPTE2P4-201ENST00000258589 1605 ntBASIC3.61□□□□□ -1.83
VPS50Q96JG6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS50Q96JG6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS50Q96JG6 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS50Q96JG6 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS50Q96JG6 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS50Q96JG6 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS50Q96JG6 Y_RNA.72-201ENST00000362894 103 ntBASIC3.6□□□□□ -1.83
VPS50Q96JG6 Y_RNA.378-201ENST00000365652 113 ntBASIC3.6□□□□□ -1.83
VPS50Q96JG6 RNU6-190P-201ENST00000384154 102 ntBASIC3.6□□□□□ -1.83
VPS50Q96JG6 MIR670-201ENST00000390142 98 ntBASIC3.6□□□□□ -1.83
VPS50Q96JG6 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS50Q96JG6 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS50Q96JG6 AL139039.1-201ENST00000401900 692 ntBASIC3.6□□□□□ -1.83
VPS50Q96JG6 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS50Q96JG6 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS50Q96JG6 PDCL2P1-201ENST00000419302 352 ntBASIC3.6□□□□□ -1.83
VPS50Q96JG6 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.6□□□□□ -1.83
VPS50Q96JG6 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS50Q96JG6 ZNF863P-201ENST00000426746 417 ntBASIC3.6□□□□□ -1.83
VPS50Q96JG6 CALM2P2-201ENST00000428512 440 ntBASIC3.6□□□□□ -1.83
VPS50Q96JG6 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS50Q96JG6 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.6□□□□□ -1.83
VPS50Q96JG6 AL445584.1-201ENST00000431451 330 ntBASIC3.6□□□□□ -1.83
VPS50Q96JG6 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS50Q96JG6 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS50Q96JG6 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.6□□□□□ -1.83
VPS50Q96JG6 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS50Q96JG6 AL590639.1-201ENST00000456484 337 ntBASIC3.6□□□□□ -1.83
VPS50Q96JG6 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS50Q96JG6 RPL21P8-201ENST00000465083 535 ntBASIC3.6□□□□□ -1.83
VPS50Q96JG6 RPL7P5-201ENST00000471472 736 ntBASIC3.6□□□□□ -1.83
VPS50Q96JG6 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS50Q96JG6 Y_RNA.665-201ENST00000516177 98 ntBASIC3.6□□□□□ -1.83
VPS50Q96JG6 BTF3P12-201ENST00000519620 469 ntBASIC3.6□□□□□ -1.83
VPS50Q96JG6 AC087369.1-201ENST00000520775 996 ntBASIC3.6□□□□□ -1.83
VPS50Q96JG6 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS50Q96JG6 RANP3-201ENST00000530970 276 ntBASIC3.6□□□□□ -1.83
VPS50Q96JG6 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS50Q96JG6 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS50Q96JG6 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.6□□□□□ -1.83
VPS50Q96JG6 AC091135.1-201ENST00000585943 307 ntBASIC3.6□□□□□ -1.83
VPS50Q96JG6 AC106900.2-201ENST00000604994 317 ntBASIC3.6□□□□□ -1.83
VPS50Q96JG6 DUSP12P1-201ENST00000612874 516 ntBASIC3.6□□□□□ -1.83
VPS50Q96JG6 AL357559.1-201ENST00000622228 274 ntBASIC3.6□□□□□ -1.83
VPS50Q96JG6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS50Q96JG6 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS50Q96JG6 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
VPS50Q96JG6 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VPS50Q96JG6 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VPS50Q96JG6 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
VPS50Q96JG6 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VPS50Q96JG6 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VPS50Q96JG6 RNU6-845P-201ENST00000362578 103 ntBASIC3.59□□□□□ -1.83
VPS50Q96JG6 RNU6-522P-201ENST00000364497 107 ntBASIC3.59□□□□□ -1.83
VPS50Q96JG6 RNU6-767P-201ENST00000384132 107 ntBASIC3.59□□□□□ -1.83
VPS50Q96JG6 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
VPS50Q96JG6 AL513331.1-201ENST00000411908 397 ntBASIC3.59□□□□□ -1.83
VPS50Q96JG6 AL353678.1-201ENST00000422735 741 ntBASIC3.59□□□□□ -1.83
VPS50Q96JG6 AC012498.1-201ENST00000424037 437 ntBASIC3.59□□□□□ -1.83
VPS50Q96JG6 AL451062.2-201ENST00000427515 271 ntBASIC3.59□□□□□ -1.83
VPS50Q96JG6 PRDX3P3-201ENST00000447765 522 ntBASIC3.59□□□□□ -1.83
VPS50Q96JG6 AC092001.1-201ENST00000453012 261 ntBASIC3.59□□□□□ -1.83
VPS50Q96JG6 RPS27P29-201ENST00000463110 252 ntBASIC3.59□□□□□ -1.83
VPS50Q96JG6 RPL31P60-201ENST00000478450 367 ntBASIC3.59□□□□□ -1.83
VPS50Q96JG6 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.59□□□□□ -1.83
VPS50Q96JG6 RN7SKP18-201ENST00000516005 275 ntBASIC3.59□□□□□ -1.83
VPS50Q96JG6 SNORA70.16-201ENST00000516390 95 ntBASIC3.59□□□□□ -1.83
VPS50Q96JG6 RNA5SP471-201ENST00000516971 106 ntBASIC3.59□□□□□ -1.83
VPS50Q96JG6 TRMT10BP1-201ENST00000519377 943 ntBASIC3.59□□□□□ -1.83
VPS50Q96JG6 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS50Q96JG6 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS50Q96JG6 AC087499.8-201ENST00000578406 226 ntBASIC3.59□□□□□ -1.83
VPS50Q96JG6 AC022893.3-201ENST00000607665 437 ntBASIC3.59□□□□□ -1.83
VPS50Q96JG6 AC009248.2-201ENST00000619826 254 ntBASIC3.59□□□□□ -1.83
VPS50Q96JG6 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS50Q96JG6 HSPA8P4-201ENST00000511877 1920 ntBASIC3.59□□□□□ -1.83
VPS50Q96JG6 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
VPS50Q96JG6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.59□□□□□ -1.84
VPS50Q96JG6 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS50Q96JG6 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS50Q96JG6 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
VPS50Q96JG6 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS50Q96JG6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS50Q96JG6 RNU6-797P-201ENST00000363101 109 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 Y_RNA.373-201ENST00000365600 103 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 RNU6-1009P-201ENST00000390996 107 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 RNU4-46P-201ENST00000410818 138 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 RNU2-41P-201ENST00000410991 178 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 RNU6-387P-201ENST00000411331 105 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 RNA5SP111-201ENST00000411386 101 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms