Protein–RNA interactions for Protein: Q96BT1

C3orf49, Putative uncharacterized protein C3orf49, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49Q96BT1 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
C3orf49Q96BT1 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.37□□□□□ -1.87
C3orf49Q96BT1 AC010680.1-201ENST00000590024 3590 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
C3orf49Q96BT1 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
C3orf49Q96BT1 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.37□□□□□ -1.87
C3orf49Q96BT1 AP004289.2-201ENST00000444413 1457 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 RNU6-778P-201ENST00000363269 103 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 RNA5SP387-201ENST00000364226 106 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
C3orf49Q96BT1 MIR578-201ENST00000384828 96 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
C3orf49Q96BT1 RNA5SP252-201ENST00000391131 119 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 AL606923.1-201ENST00000406616 190 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 RNU6-1025P-201ENST00000410629 104 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 SNORA57.3-201ENST00000411095 141 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.37□□□□□ -1.87
C3orf49Q96BT1 AL139247.1-201ENST00000422768 325 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.37□□□□□ -1.87
C3orf49Q96BT1 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.37□□□□□ -1.87
C3orf49Q96BT1 AL669831.1-202ENST00000428504 417 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 YME1L1P1-201ENST00000429435 297 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 MRPS10P2-201ENST00000431226 381 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 GTF2IP13-201ENST00000438487 386 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.37□□□□□ -1.87
C3orf49Q96BT1 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.37□□□□□ -1.87
C3orf49Q96BT1 AL360271.2-201ENST00000447710 161 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 AL133547.1-201ENST00000448546 220 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.37□□□□□ -1.87
C3orf49Q96BT1 SCARNA18-201ENST00000459004 134 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 HMGN2P13-201ENST00000476476 274 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.37□□□□□ -1.87
C3orf49Q96BT1 RPL38P4-201ENST00000502376 214 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.37□□□□□ -1.87
C3orf49Q96BT1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.37□□□□□ -1.87
C3orf49Q96BT1 RNU6-703P-201ENST00000516946 107 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.37□□□□□ -1.87
C3orf49Q96BT1 AC008011.1-201ENST00000545989 227 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.37□□□□□ -1.87
C3orf49Q96BT1 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.37□□□□□ -1.87
C3orf49Q96BT1 AL391261.3-201ENST00000557194 520 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.37□□□□□ -1.87
C3orf49Q96BT1 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.37□□□□□ -1.87
C3orf49Q96BT1 MIR3186-201ENST00000577404 85 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.37□□□□□ -1.87
C3orf49Q96BT1 AC008739.3-201ENST00000603262 127 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
C3orf49Q96BT1 AC002553.4-201ENST00000616896 331 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
C3orf49Q96BT1 MAPK10-322ENST00000641485 4530 ntBASIC3.37□□□□□ -1.87
C3orf49Q96BT1 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
C3orf49Q96BT1 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.36□□□□□ -1.87
C3orf49Q96BT1 MFSD8-236ENST00000641509 4050 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
C3orf49Q96BT1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
C3orf49Q96BT1 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.36□□□□□ -1.87
C3orf49Q96BT1 RNU6-884P-201ENST00000363889 107 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 RNU6-715P-201ENST00000365204 103 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 RNU4-20P-201ENST00000365601 151 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 RNU6-877P-201ENST00000383868 107 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 RNU6-38P-201ENST00000384085 107 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 MIR514A2-201ENST00000385131 88 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 MIR514A3-201ENST00000385132 88 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 MIR591-201ENST00000385290 95 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
C3orf49Q96BT1 SNORD37.1-201ENST00000390968 65 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
C3orf49Q96BT1 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.36□□□□□ -1.87
C3orf49Q96BT1 RN7SKP156-201ENST00000410308 342 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 OR9R1P-201ENST00000412200 877 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 BX323014.1-201ENST00000412876 237 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.36□□□□□ -1.87
C3orf49Q96BT1 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
C3orf49Q96BT1 SKA2P1-201ENST00000425592 390 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.36□□□□□ -1.87
C3orf49Q96BT1 AL139415.2-201ENST00000431968 163 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 NEK4P1-201ENST00000433383 879 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.36□□□□□ -1.87
C3orf49Q96BT1 AL714022.1-201ENST00000439897 151 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 CALM1P1-201ENST00000442082 433 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 BRK1P2-201ENST00000442875 223 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 RPS15AP27-201ENST00000449183 343 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 HMGB3P8-201ENST00000449709 577 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.36□□□□□ -1.87
C3orf49Q96BT1 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.36□□□□□ -1.87
C3orf49Q96BT1 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.36□□□□□ -1.87
C3orf49Q96BT1 RNU6-333P-201ENST00000459117 107 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 AL133162.1-201ENST00000463228 453 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 RPL7P49-201ENST00000471402 708 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.36□□□□□ -1.87
C3orf49Q96BT1 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.36□□□□□ -1.87
C3orf49Q96BT1 AC104136.1-201ENST00000512969 394 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 AC112206.3-201ENST00000514578 389 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 LRRC34P2-201ENST00000514850 553 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 AC025755.1-201ENST00000521306 278 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 MTND4P7-201ENST00000523876 130 ntBASIC3.36□□□□□ -1.87
C3orf49Q96BT1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms