Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.87□□□□□ -2.27
TTC28Q96AY4 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC0.87□□□□□ -2.27
TTC28Q96AY4 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC0.87□□□□□ -2.27
TTC28Q96AY4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC0.87□□□□□ -2.27
TTC28Q96AY4 AC013244.2-201ENST00000603396 103 ntBASIC0.87□□□□□ -2.27
TTC28Q96AY4 MIR6835-201ENST00000621552 64 ntBASIC0.87□□□□□ -2.27
TTC28Q96AY4 RPL7P30-201ENST00000420888 709 ntBASIC0.87□□□□□ -2.27
TTC28Q96AY4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC0.87□□□□□ -2.27
TTC28Q96AY4 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC0.87□□□□□ -2.27
TTC28Q96AY4 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC0.87□□□□□ -2.27
TTC28Q96AY4 AC087272.1-201ENST00000523624 533 ntBASIC0.87□□□□□ -2.27
TTC28Q96AY4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC0.87□□□□□ -2.27
TTC28Q96AY4 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.87□□□□□ -2.27
TTC28Q96AY4 NUTF2P8-201ENST00000604593 363 ntBASIC0.87□□□□□ -2.27
TTC28Q96AY4 AC055876.5-201ENST00000605667 259 ntBASIC0.87□□□□□ -2.27
TTC28Q96AY4 AC135803.1-201ENST00000608748 565 ntBASIC0.87□□□□□ -2.27
TTC28Q96AY4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC0.87□□□□□ -2.27
TTC28Q96AY4 AC027309.3-201ENST00000623419 351 ntBASIC0.87□□□□□ -2.27
TTC28Q96AY4 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
TTC28Q96AY4 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
TTC28Q96AY4 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.86□□□□□ -2.27
TTC28Q96AY4 RNU6-112P-201ENST00000363599 104 ntBASIC0.86□□□□□ -2.27
TTC28Q96AY4 Y_RNA.493-201ENST00000384422 102 ntBASIC0.86□□□□□ -2.27
TTC28Q96AY4 MIR627-201ENST00000384979 97 ntBASIC0.86□□□□□ -2.27
TTC28Q96AY4 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.86□□□□□ -2.27
TTC28Q96AY4 HMGB1P49-201ENST00000418882 569 ntBASIC0.86□□□□□ -2.27
TTC28Q96AY4 AL392003.1-201ENST00000434394 243 ntBASIC0.86□□□□□ -2.27
TTC28Q96AY4 YWHAZP8-201ENST00000436935 731 ntBASIC0.86□□□□□ -2.27
TTC28Q96AY4 AL034418.1-201ENST00000448675 860 ntBASIC0.86□□□□□ -2.27
TTC28Q96AY4 RPS20P10-201ENST00000451209 253 ntBASIC0.86□□□□□ -2.27
TTC28Q96AY4 SNORD97-201ENST00000459187 142 ntBASIC0.86□□□□□ -2.27
TTC28Q96AY4 AC090096.1-201ENST00000489168 390 ntBASIC0.86□□□□□ -2.27
TTC28Q96AY4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.86□□□□□ -2.27
TTC28Q96AY4 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.86□□□□□ -2.27
TTC28Q96AY4 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.86□□□□□ -2.27
TTC28Q96AY4 AL136363.1-201ENST00000605349 337 ntBASIC0.86□□□□□ -2.27
TTC28Q96AY4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC0.86□□□□□ -2.27
TTC28Q96AY4 AC087359.1-201ENST00000508335 1740 ntBASIC0.86□□□□□ -2.27
TTC28Q96AY4 Y_RNA.25-201ENST00000362528 102 ntBASIC0.86□□□□□ -2.27
TTC28Q96AY4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC0.86□□□□□ -2.27
TTC28Q96AY4 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.86□□□□□ -2.27
TTC28Q96AY4 PGBD4P6-201ENST00000421501 610 ntBASIC0.86□□□□□ -2.27
TTC28Q96AY4 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.86□□□□□ -2.27
TTC28Q96AY4 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC0.86□□□□□ -2.27
TTC28Q96AY4 AC087588.1-201ENST00000462203 316 ntBASIC0.86□□□□□ -2.27
TTC28Q96AY4 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.86□□□□□ -2.27
TTC28Q96AY4 UBE2Q2P9-201ENST00000490086 202 ntBASIC0.86□□□□□ -2.27
TTC28Q96AY4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.86□□□□□ -2.27
TTC28Q96AY4 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.86□□□□□ -2.27
TTC28Q96AY4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.86□□□□□ -2.27
TTC28Q96AY4 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.86□□□□□ -2.27
TTC28Q96AY4 HSPE1P7-201ENST00000604681 321 ntBASIC0.86□□□□□ -2.27
TTC28Q96AY4 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
TTC28Q96AY4 RNA5SP499-201ENST00000363982 119 ntBASIC0.85□□□□□ -2.27
TTC28Q96AY4 SNORD114-15-201ENST00000364687 72 ntBASIC0.85□□□□□ -2.27
TTC28Q96AY4 RNU6-1074P-201ENST00000383995 104 ntBASIC0.85□□□□□ -2.27
TTC28Q96AY4 OR6C66P-201ENST00000414917 930 ntBASIC0.85□□□□□ -2.27
TTC28Q96AY4 AL356320.2-201ENST00000417263 507 ntBASIC0.85□□□□□ -2.27
TTC28Q96AY4 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.85□□□□□ -2.27
TTC28Q96AY4 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.85□□□□□ -2.27
TTC28Q96AY4 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC0.85□□□□□ -2.27
TTC28Q96AY4 RNU1-104P-201ENST00000517280 175 ntBASIC0.85□□□□□ -2.27
TTC28Q96AY4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC0.85□□□□□ -2.27
TTC28Q96AY4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.85□□□□□ -2.27
TTC28Q96AY4 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC0.85□□□□□ -2.27
TTC28Q96AY4 AC106028.5-201ENST00000610332 395 ntBASIC0.85□□□□□ -2.27
TTC28Q96AY4 AL161629.2-201ENST00000615347 275 ntBASIC0.85□□□□□ -2.27
TTC28Q96AY4 Y_RNA.288-201ENST00000364854 92 ntBASIC0.84□□□□□ -2.27
TTC28Q96AY4 MIR767-201ENST00000390228 109 ntBASIC0.84□□□□□ -2.27
TTC28Q96AY4 SNORD23.1-201ENST00000408212 104 ntBASIC0.84□□□□□ -2.27
TTC28Q96AY4 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC0.84□□□□□ -2.27
TTC28Q96AY4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.84□□□□□ -2.27
TTC28Q96AY4 ZNF736P6Y-201ENST00000447526 1213 ntBASIC0.84□□□□□ -2.27
TTC28Q96AY4 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC0.84□□□□□ -2.27
TTC28Q96AY4 RPS29P23-201ENST00000458635 123 ntBASIC0.84□□□□□ -2.27
TTC28Q96AY4 BZW1P2-201ENST00000473537 826 ntBASIC0.84□□□□□ -2.27
TTC28Q96AY4 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC0.84□□□□□ -2.27
TTC28Q96AY4 AC090897.2-201ENST00000581715 130 ntBASIC0.84□□□□□ -2.27
TTC28Q96AY4 MIR3117-201ENST00000584034 78 ntBASIC0.84□□□□□ -2.27
TTC28Q96AY4 AC243829.6-201ENST00000612652 106 ntBASIC0.84□□□□□ -2.27
TTC28Q96AY4 AL031601.2-202ENST00000622650 282 ntBASIC0.84□□□□□ -2.27
TTC28Q96AY4 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.84□□□□□ -2.27
TTC28Q96AY4 MTND4P8-201ENST00000514997 1362 ntBASIC0.84□□□□□ -2.27
TTC28Q96AY4 RNA5SP258-201ENST00000362750 119 ntBASIC0.84□□□□□ -2.28
TTC28Q96AY4 Y_RNA.65-201ENST00000362846 100 ntBASIC0.84□□□□□ -2.28
TTC28Q96AY4 RNU6-942P-201ENST00000363002 107 ntBASIC0.84□□□□□ -2.28
TTC28Q96AY4 MIR329-1-201ENST00000385028 80 ntBASIC0.84□□□□□ -2.28
TTC28Q96AY4 RNU4-72P-201ENST00000410754 173 ntBASIC0.84□□□□□ -2.28
TTC28Q96AY4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC0.84□□□□□ -2.28
TTC28Q96AY4 RPL7P29-201ENST00000437151 728 ntBASIC0.84□□□□□ -2.28
TTC28Q96AY4 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.84□□□□□ -2.28
TTC28Q96AY4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.84□□□□□ -2.28
TTC28Q96AY4 AC025459.1-201ENST00000504072 156 ntBASIC0.84□□□□□ -2.28
TTC28Q96AY4 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.84□□□□□ -2.28
TTC28Q96AY4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC0.84□□□□□ -2.28
TTC28Q96AY4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC0.84□□□□□ -2.28
TTC28Q96AY4 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.84□□□□□ -2.28
TTC28Q96AY4 AC133485.1-201ENST00000567176 124 ntBASIC0.84□□□□□ -2.28
TTC28Q96AY4 AC138907.6-201ENST00000568401 126 ntBASIC0.84□□□□□ -2.28
TTC28Q96AY4 MIR4504-201ENST00000577413 92 ntBASIC0.84□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms