Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 MIR888-201ENST00000401186 77 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 RNU6-193P-201ENST00000410977 107 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 SNRPEP10-201ENST00000420249 274 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 MRPS10P2-201ENST00000431226 381 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 NDUFB1P1-201ENST00000435191 180 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 HMGB3P8-201ENST00000449709 577 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 snoU13.28-201ENST00000459235 104 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 RNU7-180P-201ENST00000459240 63 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 HMGN2P13-201ENST00000476476 274 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 RPS4XP22-201ENST00000480755 780 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 AC139453.3-201ENST00000493276 369 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 AP002812.1-201ENST00000495378 474 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 FCF1P3-201ENST00000496394 590 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 RNU6-1178P-201ENST00000516674 107 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 RNU6-711P-201ENST00000517255 106 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 SUB1P1-201ENST00000524415 382 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 AC068135.2-201ENST00000569293 1028 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 AC015917.1-201ENST00000579654 510 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 MIR5692A1-201ENST00000580523 69 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 NRBF2P5-201ENST00000603087 788 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 AP000907.4-201ENST00000604143 237 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 AL355598.1-201ENST00000604169 202 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 SNORA62.6-201ENST00000606322 83 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 AC092628.2-201ENST00000622492 339 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 AC073073.2-201ENST00000609827 2578 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 AL161912.2-201ENST00000565707 3007 ntBASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 RNU6-451P-201ENST00000362921 107 ntBASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 RNU6-884P-201ENST00000363889 107 ntBASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 RNA5SP42-201ENST00000364278 115 ntBASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 RNU6-715P-201ENST00000365204 103 ntBASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 AL445584.1-201ENST00000431451 330 ntBASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 MTCO3P38-201ENST00000468910 766 ntBASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 RPL23AP11-201ENST00000475260 469 ntBASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 FAM92A1P2-202ENST00000504766 877 ntBASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 MTND4P7-201ENST00000523876 130 ntBASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 AL163153.1-201ENST00000554223 283 ntBASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 MIR3158-1-201ENST00000583596 81 ntBASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 RBM11P1-201ENST00000604951 799 ntBASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 CR392039.5-201ENST00000623201 510 ntBASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.19□□□□□ -1.9
RAB40AQ8WXH6 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.18□□□□□ -1.9
RAB40AQ8WXH6 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.18□□□□□ -1.9
RAB40AQ8WXH6 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.18□□□□□ -1.9
RAB40AQ8WXH6 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RAB40AQ8WXH6 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.18□□□□□ -1.9
RAB40AQ8WXH6 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
RAB40AQ8WXH6 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RAB40AQ8WXH6 RNU4-66P-201ENST00000365199 138 ntBASIC3.18□□□□□ -1.9
RAB40AQ8WXH6 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RAB40AQ8WXH6 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
RAB40AQ8WXH6 AL359837.1-201ENST00000381357 287 ntBASIC3.18□□□□□ -1.9
RAB40AQ8WXH6 RNU6-1127P-201ENST00000384580 107 ntBASIC3.18□□□□□ -1.9
RAB40AQ8WXH6 MIR200C-201ENST00000384980 68 ntBASIC3.18□□□□□ -1.9
RAB40AQ8WXH6 RNA5SP252-201ENST00000391131 119 ntBASIC3.18□□□□□ -1.9
RAB40AQ8WXH6 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.18□□□□□ -1.9
RAB40AQ8WXH6 OR9R1P-201ENST00000412200 877 ntBASIC3.18□□□□□ -1.9
RAB40AQ8WXH6 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.18□□□□□ -1.9
RAB40AQ8WXH6 RPS15AP6-201ENST00000420703 385 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms