Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SNORD62.1-201ENST00000362541 86 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 Y_RNA.89-201ENST00000363031 102 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 Y_RNA.160-201ENST00000363677 92 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 RNVU1-3-201ENST00000364313 161 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 Y_RNA.409-201ENST00000383990 98 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 MIR320C1-201ENST00000408566 88 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 RNA5SP56-201ENST00000410277 118 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.19□□□□□ -1.9
SNED1Q8TER0 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.19□□□□□ -1.9
SNED1Q8TER0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.19□□□□□ -1.9
SNED1Q8TER0 LSM1P1-201ENST00000438629 273 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 RPL7P52-201ENST00000449200 742 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SNED1Q8TER0 RPS24P6-201ENST00000452670 400 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 MEMO1P3-201ENST00000459811 302 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC097493.1-201ENST00000463958 372 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC079382.1-201ENST00000493346 557 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 MTCYBP18-201ENST00000501056 747 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.19□□□□□ -1.9
SNED1Q8TER0 MTCO2P30-201ENST00000503662 364 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC022447.3-201ENST00000506865 495 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 ARL4AP2-201ENST00000507378 601 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC114786.4-201ENST00000508771 728 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC105914.1-201ENST00000511798 226 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC026412.2-201ENST00000512270 1075 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SNED1Q8TER0 RNU6-991P-201ENST00000516168 107 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 Y_RNA.704-201ENST00000516851 102 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 ARL2BPP5-201ENST00000523141 481 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC068587.4-201ENST00000533893 186 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC090502.2-201ENST00000549267 280 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC007038.2-201ENST00000608095 740 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC064836.2-201ENST00000609491 462 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC243773.3-201ENST00000613270 256 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC002546.1-201ENST00000588041 2504 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.18□□□□□ -1.9
SNED1Q8TER0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
SNED1Q8TER0 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SNED1Q8TER0 ZNF680P1-201ENST00000436625 1469 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
SNED1Q8TER0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SNED1Q8TER0 SNRPEP3-201ENST00000338402 276 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 RNU6-50P-201ENST00000362356 103 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 RNU6-534P-201ENST00000364877 106 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 RNU6-877P-201ENST00000383868 107 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 RNU6-809P-201ENST00000384461 107 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 MIR506-201ENST00000384998 124 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 MT-TD-201ENST00000387419 68 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 AL079342.1-201ENST00000401460 267 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.18□□□□□ -1.9
SNED1Q8TER0 RPL21P111-201ENST00000418453 477 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.18□□□□□ -1.9
SNED1Q8TER0 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.18□□□□□ -1.9
SNED1Q8TER0 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.18□□□□□ -1.9
SNED1Q8TER0 AC006548.1-201ENST00000427470 102 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.18□□□□□ -1.9
SNED1Q8TER0 MTCYBP45-201ENST00000435243 565 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 AC093019.1-201ENST00000443135 252 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 MTND6P13-201ENST00000443510 523 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.18□□□□□ -1.9
SNED1Q8TER0 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.18□□□□□ -1.9
SNED1Q8TER0 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.18□□□□□ -1.9
SNED1Q8TER0 HMGN1P12-201ENST00000499125 195 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 RNA5SP468-201ENST00000516782 93 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.18□□□□□ -1.9
SNED1Q8TER0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.18□□□□□ -1.9
SNED1Q8TER0 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.18□□□□□ -1.9
SNED1Q8TER0 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.18□□□□□ -1.9
SNED1Q8TER0 SYF2P1-201ENST00000550658 413 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.18□□□□□ -1.9
SNED1Q8TER0 RPL21P5-201ENST00000554662 472 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 AL157687.1-201ENST00000554853 619 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 MIR3682-201ENST00000581338 84 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 MIR544B-201ENST00000582372 78 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 MIR4307-201ENST00000582802 84 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
SNED1Q8TER0 MIR3605-201ENST00000583214 100 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 AC044792.1-201ENST00000593294 196 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.18□□□□□ -1.9
SNED1Q8TER0 AC005034.5-201ENST00000604219 466 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SNED1Q8TER0 AC104010.1-201ENST00000616889 150 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 AL445264.1-201ENST00000621719 171 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.18□□□□□ -1.9
SNED1Q8TER0 CR381572.1-201ENST00000625098 102 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 AC008264.2-201ENST00000610193 3731 ntBASIC3.18□□□□□ -1.9
SNED1Q8TER0 MTND5P19-201ENST00000424872 1794 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SNED1Q8TER0 AC007256.1-201ENST00000392253 2765 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 RNU6-483P-201ENST00000384088 108 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 MIR27B-201ENST00000385129 97 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SNED1Q8TER0 SNRPEP2-201ENST00000397592 279 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.17□□□□□ -1.9
SNED1Q8TER0 RNA5SP129-201ENST00000410276 118 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms