Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 AC018555.1-201ENST00000567548 1980 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 Y_RNA.447-201ENST00000384184 113 ntBASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 Y_RNA.482-201ENST00000384377 111 ntBASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 Y_RNA.512-201ENST00000384518 102 ntBASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 MIR454-201ENST00000390180 115 ntBASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 ARF4P3-201ENST00000397387 509 ntBASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 EIF5P1-201ENST00000400019 1231 ntBASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 AC096632.1-201ENST00000427395 310 ntBASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 AC008155.2-201ENST00000464337 397 ntBASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 AC104563.1-201ENST00000476147 376 ntBASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 AC069499.1-201ENST00000489433 509 ntBASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 AC097473.1-201ENST00000508142 408 ntBASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 RNU4-60P-201ENST00000517239 135 ntBASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 AC109635.4-202ENST00000531666 412 ntBASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 UBE2L4-201ENST00000587688 464 ntBASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 AL161756.2-201ENST00000604597 246 ntBASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 AC096577.2-201ENST00000611455 153 ntBASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 AC012409.4-201ENST00000612923 249 ntBASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 U2.1-201ENST00000618978 145 ntBASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 PABPC1P7-201ENST00000413177 1513 ntBASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 AC007656.2-201ENST00000624902 4547 ntBASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 AC121333.1-201ENST00000567488 2709 ntBASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.3□□□□□ -1.72
SH3RF3Q8TEJ3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 AL049781.1-201ENST00000623195 3585 ntBASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 RNU6-1252P-201ENST00000363054 104 ntBASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 Y_RNA.212-201ENST00000364177 102 ntBASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 RNU6-1109P-201ENST00000391187 107 ntBASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 AL391219.1-201ENST00000422570 483 ntBASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 CKS1BP5-201ENST00000434172 273 ntBASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 AL590399.6-201ENST00000446396 307 ntBASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 MTND1P17-201ENST00000448961 204 ntBASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 AL118520.1-201ENST00000450770 291 ntBASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 RBMY2UP-201ENST00000453474 324 ntBASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 RPS29P15-201ENST00000458329 171 ntBASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 AC126389.1-201ENST00000477436 290 ntBASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 AP000926.1-201ENST00000479573 241 ntBASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 AC025518.1-201ENST00000479856 347 ntBASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 VN1R104P-201ENST00000505115 1009 ntBASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 Y_RNA.680-201ENST00000516441 93 ntBASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 MIR4775-201ENST00000581168 75 ntBASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 AL353997.4-201ENST00000586196 166 ntBASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 U4.6-201ENST00000621618 127 ntBASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 AC138627.2-201ENST00000624202 601 ntBASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 CDC27P3-201ENST00000635418 1910 ntBASIC4.29□□□□□ -1.72
SH3RF3Q8TEJ3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 Y_RNA.80-201ENST00000362996 102 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 Y_RNA.396-201ENST00000383949 103 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 Y_RNA.489-201ENST00000384410 101 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 PTMAP5-201ENST00000393073 333 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 AL031679.1-201ENST00000400616 525 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 AL606923.1-201ENST00000406616 190 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 RPL23AP48-201ENST00000406913 488 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 AC012065.2-201ENST00000421295 375 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms