Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCHCR1Q8TD31 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.94□□□□□ -1.78
CCHCR1Q8TD31 AC090115.3-201ENST00000553218 849 ntBASIC3.94□□□□□ -1.78
CCHCR1Q8TD31 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.94□□□□□ -1.78
CCHCR1Q8TD31 MIR3921-201ENST00000577308 85 ntBASIC3.94□□□□□ -1.78
CCHCR1Q8TD31 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.94□□□□□ -1.78
CCHCR1Q8TD31 AC053481.4-201ENST00000583164 216 ntBASIC3.94□□□□□ -1.78
CCHCR1Q8TD31 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.94□□□□□ -1.78
CCHCR1Q8TD31 VN1R85P-201ENST00000601587 426 ntBASIC3.94□□□□□ -1.78
CCHCR1Q8TD31 AL050343.2-201ENST00000607338 280 ntBASIC3.94□□□□□ -1.78
CCHCR1Q8TD31 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.94□□□□□ -1.78
CCHCR1Q8TD31 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CCHCR1Q8TD31 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCHCR1Q8TD31 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCHCR1Q8TD31 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCHCR1Q8TD31 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 PWAR6-201ENST00000552334 4618 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 FRG1CP-201ENST00000358464 769 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 RNU6-715P-201ENST00000365204 103 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 XGY1-201ENST00000381172 446 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 RNU6-1013P-201ENST00000384180 107 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 RNU6-393P-201ENST00000384475 107 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 Y_RNA.534-201ENST00000384599 112 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 RPL7P10-201ENST00000417407 739 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 ARF4P2-201ENST00000430209 526 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 HMGB3P11-201ENST00000440127 604 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 DYNLL1P5-201ENST00000467158 270 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 AL049874.1-201ENST00000489560 388 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 HIGD1AP13-201ENST00000509878 289 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 AC104136.1-201ENST00000512969 394 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 RNU2-69P-201ENST00000516061 100 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 SNORA31.8-201ENST00000516327 108 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 SCARNA15.2-201ENST00000516409 127 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 AP000889.2-201ENST00000532684 490 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 HPRT1P3-201ENST00000539521 576 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 AC106782.4-201ENST00000568264 210 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 MIR3942-201ENST00000585264 109 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 AP001330.4-201ENST00000604350 154 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 AC113139.1-201ENST00000605049 239 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 MIR15A-201ENST00000607334 83 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 MIR8058-201ENST00000615737 89 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 XIST_intron.1-201ENST00000619444 68 ntBASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCHCR1Q8TD31 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 OR4G2P-202ENST00000641004 1759 ntBASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 RNU6-434P-201ENST00000384376 107 ntBASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 SNORA57.1-201ENST00000391227 145 ntBASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 AL391417.1-201ENST00000404100 426 ntBASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 MIR1193-201ENST00000408109 78 ntBASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 RPS15AP6-201ENST00000420703 385 ntBASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 RPL7P2-201ENST00000427639 268 ntBASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 AC008264.1-201ENST00000447612 367 ntBASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 RNU7-167P-201ENST00000459160 62 ntBASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 TRBVA-201ENST00000498804 316 ntBASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 U2.17-201ENST00000611454 95 ntBASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 AC090574.1-201ENST00000623186 233 ntBASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 MTND1P37-201ENST00000636562 264 ntBASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.92□□□□□ -1.78
CCHCR1Q8TD31 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 Y_RNA.58-201ENST00000362807 102 ntBASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 RNU6-254P-201ENST00000363377 107 ntBASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 Y_RNA.154-201ENST00000363624 102 ntBASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 Y_RNA.212-201ENST00000364177 102 ntBASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 RNU6-371P-201ENST00000364283 108 ntBASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 RNY3P1-201ENST00000365085 102 ntBASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 RNY3-201ENST00000365484 102 ntBASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 Y_RNA.490-201ENST00000384413 102 ntBASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 EI24P2-201ENST00000397776 1076 ntBASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 AL139039.1-201ENST00000401900 692 ntBASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 AL445189.1-201ENST00000405722 338 ntBASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 BX842559.1-201ENST00000419615 532 ntBASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 NDUFB4P7-201ENST00000423198 363 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms