Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ZYXP1-201ENST00000617638 118 ntBASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 AL365265.1-201ENST00000621045 234 ntBASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 MFSD8-242ENST00000641690 4199 ntBASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.65□□□□□ -1.66
SHKBP1Q8TBC3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SHKBP1Q8TBC3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SHKBP1Q8TBC3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SHKBP1Q8TBC3 MIR331-201ENST00000362302 94 ntBASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 RNU6-595P-201ENST00000363944 107 ntBASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 Y_RNA.439-201ENST00000384119 94 ntBASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 RNU6-1117P-201ENST00000384525 104 ntBASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 SNORA57.1-201ENST00000391227 145 ntBASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 RNU2-51P-201ENST00000410708 197 ntBASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 CYCSP10-201ENST00000417973 294 ntBASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 RPS15AP6-201ENST00000420703 385 ntBASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 AC091286.1-201ENST00000431233 461 ntBASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 AC012671.1-201ENST00000451912 203 ntBASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 RPL21P104-201ENST00000464143 478 ntBASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 AC109925.1-201ENST00000478069 331 ntBASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 MTND3P25-201ENST00000509243 135 ntBASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 IGKV2-38-201ENST00000517443 247 ntBASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 MIR6891-201ENST00000618788 93 ntBASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 AC005332.5-201ENST00000591222 2919 ntBASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHKBP1Q8TBC3 AC107068.1-201ENST00000563286 4218 ntBASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 MAPK10-286ENST00000641208 8747 ntBASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 RNU1-20P-201ENST00000363314 162 ntBASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 RNU6-933P-201ENST00000384424 107 ntBASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 RNU6-735P-201ENST00000410612 107 ntBASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 Y_RNA.626-201ENST00000411288 95 ntBASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 RPL31P2-201ENST00000413849 377 ntBASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 AC004866.2-201ENST00000438285 481 ntBASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 RPS26P2-201ENST00000440331 348 ntBASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 MRPL48P1-201ENST00000445390 636 ntBASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 AL360271.2-201ENST00000447710 161 ntBASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 AC022431.1-201ENST00000450941 438 ntBASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 MTND5P41-201ENST00000517498 206 ntBASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 IGLVIV-53-201ENST00000520107 367 ntBASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 AC022559.1-201ENST00000520905 205 ntBASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 AC093023.1-201ENST00000547375 507 ntBASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 MIR5696-201ENST00000578474 85 ntBASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 MIR5692A1-201ENST00000580523 69 ntBASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 BPIFA4P-203ENST00000603168 689 ntBASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 AC072026.1-201ENST00000605023 201 ntBASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 uc_338.13-201ENST00000618243 179 ntBASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SHKBP1Q8TBC3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 RNU6-858P-201ENST00000362436 107 ntBASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 RNU6-47P-201ENST00000383866 107 ntBASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 RPS26P8-201ENST00000393490 348 ntBASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 RNA5SP146-201ENST00000410743 123 ntBASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 RPL30P3-201ENST00000424262 333 ntBASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 AC091021.1-201ENST00000468051 388 ntBASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 SEPT14P8-201ENST00000508026 178 ntBASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 PARP4P3-201ENST00000510265 317 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms