Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 MIR196B-201ENST00000384852 84 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 SNORA40.3-201ENST00000390964 122 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 AL139039.1-201ENST00000401900 692 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 HMGN1P14-201ENST00000412459 517 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 ZNF90P2-204ENST00000419323 1075 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 SEPT2P1-201ENST00000419651 180 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 AC099548.1-201ENST00000421443 426 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 HMGB1P27-201ENST00000431429 603 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 MTND6P13-201ENST00000443510 523 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 MTND2P4-201ENST00000445034 1004 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 RPL23AP20-201ENST00000447965 421 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 CACYBPP2-201ENST00000453625 678 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 RNA5SP269-201ENST00000459032 137 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 RNU2-10P-201ENST00000516375 211 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 AP006587.4-201ENST00000526053 529 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 ELOCP31-201ENST00000540463 467 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 AL670379.6-201ENST00000603753 252 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 AL670379.11-201ENST00000604059 253 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 NUTF2P8-201ENST00000604593 363 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 AC008162.1-201ENST00000604718 254 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 AL670379.1-201ENST00000604752 252 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 AL670379.5-201ENST00000605253 252 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 AL670379.12-201ENST00000605291 253 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 AL670379.8-201ENST00000605353 252 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 AL670379.7-201ENST00000605823 252 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 AC034102.8-201ENST00000615146 484 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 AC008250.2-201ENST00000615261 205 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 AL161629.2-201ENST00000615347 275 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 ELL2P3-201ENST00000457883 1602 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 AC010680.1-201ENST00000590024 3590 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 FTLP6-201ENST00000355274 422 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 RNU5E-1-201ENST00000362477 120 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 SNORD62.1-201ENST00000362541 86 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 RNU6-1167P-201ENST00000363227 94 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 Y_RNA.111-201ENST00000363248 100 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 RNU4-1-201ENST00000363925 141 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 Y_RNA.245-201ENST00000364493 95 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 MIR592-201ENST00000384959 97 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 RPS3AP3-201ENST00000411933 242 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 RPLP0P7-201ENST00000416050 667 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 AC007283.2-201ENST00000424739 197 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 AC137499.1-201ENST00000427602 88 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 AC098826.1-201ENST00000433943 471 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 AC011816.1-201ENST00000441346 546 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 NEFMP1-201ENST00000443423 1006 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 RPL37P6-201ENST00000460682 294 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 MTCO2P29-201ENST00000465212 189 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 AC138853.1-201ENST00000503549 823 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 AC091965.2-201ENST00000512324 613 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 SNORA31.3-201ENST00000516029 96 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 AC243972.3-201ENST00000539655 198 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 DNAJC8P1-201ENST00000554535 372 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 RPS3AP4-201ENST00000555161 764 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 MIR3162-201ENST00000581818 82 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 MIR4672-201ENST00000583126 81 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 RPL12P50-201ENST00000603116 116 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 FTX_3.1-201ENST00000610451 147 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 AC025594.3-201ENST00000613068 790 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 AL589994.2-201ENST00000621124 579 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 AC010297.1-201ENST00000623948 149 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 AC092608.2-201ENST00000624427 218 ntBASIC2.41□□□□□ -2.02
C9orf40Q8IXQ3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
C9orf40Q8IXQ3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms