Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.48□□□□□ -1.53
SCUBE3Q8IX30 MIR4697-201ENST00000582977 78 ntBASIC5.48□□□□□ -1.53
SCUBE3Q8IX30 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.48□□□□□ -1.53
SCUBE3Q8IX30 U73479.1-201ENST00000618062 168 ntBASIC5.48□□□□□ -1.53
SCUBE3Q8IX30 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.48□□□□□ -1.53
SCUBE3Q8IX30 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.48□□□□□ -1.53
SCUBE3Q8IX30 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.48□□□□□ -1.53
SCUBE3Q8IX30 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 AC110491.1-201ENST00000562191 2010 ntBASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 RNU4-80P-201ENST00000363200 141 ntBASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 HLFP1-201ENST00000402375 499 ntBASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 MIR1182-201ENST00000408363 97 ntBASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 AF186996.7-201ENST00000492781 209 ntBASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 BTF3L4P4-201ENST00000506381 449 ntBASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 RN7SKP234-201ENST00000517173 224 ntBASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 AC027369.5-201ENST00000533838 755 ntBASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 MIR4512-201ENST00000583257 77 ntBASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 Y_RNA.802-201ENST00000614892 130 ntBASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 TUG1_4.1-201ENST00000619464 181 ntBASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.47□□□□□ -1.53
SCUBE3Q8IX30 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SCUBE3Q8IX30 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.53
SCUBE3Q8IX30 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SCUBE3Q8IX30 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 RPL23P2-201ENST00000320371 421 ntBASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 RNU6-78P-201ENST00000362897 107 ntBASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 RNU6-137P-201ENST00000363680 108 ntBASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 Y_RNA.542-201ENST00000384641 111 ntBASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 RNY4P18-201ENST00000391107 89 ntBASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 BTF3P11-201ENST00000426582 477 ntBASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 FTLP19-201ENST00000433300 394 ntBASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 RPS15AP5-201ENST00000436276 388 ntBASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 AL359073.1-201ENST00000448036 403 ntBASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 RPS20P10-201ENST00000451209 253 ntBASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 AL389915.2-201ENST00000454576 441 ntBASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 SNORA31.19-201ENST00000517079 126 ntBASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 CARD18-203ENST00000532895 422 ntTSL 2 BASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 CYCSP26-201ENST00000534107 320 ntBASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 MIR4431-201ENST00000579990 94 ntBASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 AC133552.1-201ENST00000569988 4007 ntBASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
SCUBE3Q8IX30 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SCUBE3Q8IX30 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SCUBE3Q8IX30 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SCUBE3Q8IX30 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SCUBE3Q8IX30 RNU6-1272P-201ENST00000362776 107 ntBASIC5.45□□□□□ -1.54
SCUBE3Q8IX30 SNORA17.1-201ENST00000362945 126 ntBASIC5.45□□□□□ -1.54
SCUBE3Q8IX30 Y_RNA.319-201ENST00000365138 92 ntBASIC5.45□□□□□ -1.54
SCUBE3Q8IX30 RNU6-166P-201ENST00000384371 107 ntBASIC5.45□□□□□ -1.54
SCUBE3Q8IX30 RNU6-376P-201ENST00000384731 106 ntBASIC5.45□□□□□ -1.54
SCUBE3Q8IX30 RNU6-837P-201ENST00000391056 108 ntBASIC5.45□□□□□ -1.54
SCUBE3Q8IX30 RNU6-159P-201ENST00000391080 106 ntBASIC5.45□□□□□ -1.54
SCUBE3Q8IX30 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.45□□□□□ -1.54
SCUBE3Q8IX30 AC016397.1-201ENST00000412463 242 ntBASIC5.45□□□□□ -1.54
SCUBE3Q8IX30 AC007560.1-201ENST00000426912 237 ntBASIC5.45□□□□□ -1.54
SCUBE3Q8IX30 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.45□□□□□ -1.54
SCUBE3Q8IX30 PSMD10P3-201ENST00000437000 448 ntBASIC5.45□□□□□ -1.54
SCUBE3Q8IX30 RPL23AP58-201ENST00000440453 469 ntBASIC5.45□□□□□ -1.54
SCUBE3Q8IX30 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC5.45□□□□□ -1.54
SCUBE3Q8IX30 snoU109.2-201ENST00000459316 135 ntBASIC5.45□□□□□ -1.54
SCUBE3Q8IX30 AL049874.1-201ENST00000489560 388 ntBASIC5.45□□□□□ -1.54
SCUBE3Q8IX30 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.45□□□□□ -1.54
SCUBE3Q8IX30 SNRPCP2-201ENST00000504370 475 ntBASIC5.45□□□□□ -1.54
SCUBE3Q8IX30 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC5.45□□□□□ -1.54
SCUBE3Q8IX30 AC098976.1-201ENST00000513014 541 ntBASIC5.45□□□□□ -1.54
SCUBE3Q8IX30 DEFB131C-201ENST00000528817 165 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms