Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RFX6Q8HWS3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RFX6Q8HWS3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFX6Q8HWS3 MTND4P14-201ENST00000435799 1354 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.54□□□□□ -1.84
RFX6Q8HWS3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RFX6Q8HWS3 RNU6-1287P-201ENST00000362914 107 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 RNA5SP197-201ENST00000363357 119 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 SNORD115-7-201ENST00000365306 82 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFX6Q8HWS3 RNU6-692P-201ENST00000384496 107 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 Y_RNA.529-201ENST00000384586 119 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 RNU6-1060P-201ENST00000384664 107 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 AL606923.1-201ENST00000406616 190 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 RAB9AP3-201ENST00000412737 573 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 OR6C66P-201ENST00000414917 930 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 AL356968.1-201ENST00000416622 474 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.54□□□□□ -1.84
RFX6Q8HWS3 AC018630.2-202ENST00000422992 927 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.54□□□□□ -1.84
RFX6Q8HWS3 AC073063.1-201ENST00000434352 607 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 HMGN2P20-201ENST00000437531 273 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 RAB9AP1-201ENST00000449393 573 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.54□□□□□ -1.84
RFX6Q8HWS3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.54□□□□□ -1.84
RFX6Q8HWS3 AL162395.1-201ENST00000457882 422 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 RPS4XP2-201ENST00000458402 793 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 AC010401.1-201ENST00000463867 348 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 AC117522.3-201ENST00000507974 584 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.54□□□□□ -1.84
RFX6Q8HWS3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.54□□□□□ -1.84
RFX6Q8HWS3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.54□□□□□ -1.84
RFX6Q8HWS3 BNIP3P6-201ENST00000549284 499 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.54□□□□□ -1.84
RFX6Q8HWS3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.54□□□□□ -1.84
RFX6Q8HWS3 RPS3AP23-202ENST00000574601 686 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 AP001836.1-201ENST00000604675 523 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 AL442067.2-201ENST00000614033 363 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 AL360181.4-201ENST00000621752 134 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.54□□□□□ -1.84
RFX6Q8HWS3 AC100810.6-201ENST00000638068 285 ntBASIC3.54□□□□□ -1.84
RFX6Q8HWS3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
RFX6Q8HWS3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFX6Q8HWS3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFX6Q8HWS3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RFX6Q8HWS3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
RFX6Q8HWS3 RNU1-64P-201ENST00000365443 163 ntBASIC3.53□□□□□ -1.84
RFX6Q8HWS3 Y_RNA.576-201ENST00000384781 102 ntBASIC3.53□□□□□ -1.84
RFX6Q8HWS3 AC009161.1-201ENST00000417306 376 ntBASIC3.53□□□□□ -1.84
RFX6Q8HWS3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.53□□□□□ -1.84
RFX6Q8HWS3 DUTP6-201ENST00000425573 462 ntBASIC3.53□□□□□ -1.84
RFX6Q8HWS3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.53□□□□□ -1.84
RFX6Q8HWS3 SRIP2-201ENST00000428470 166 ntBASIC3.53□□□□□ -1.84
RFX6Q8HWS3 CALM2P2-201ENST00000428512 440 ntBASIC3.53□□□□□ -1.84
RFX6Q8HWS3 CYCSP4-201ENST00000429682 331 ntBASIC3.53□□□□□ -1.84
RFX6Q8HWS3 BX679664.1-201ENST00000434429 253 ntBASIC3.53□□□□□ -1.84
RFX6Q8HWS3 AC007389.2-201ENST00000434630 306 ntBASIC3.53□□□□□ -1.84
RFX6Q8HWS3 AC093019.1-201ENST00000443135 252 ntBASIC3.53□□□□□ -1.84
RFX6Q8HWS3 AL118520.1-201ENST00000450770 291 ntBASIC3.53□□□□□ -1.84
RFX6Q8HWS3 MTND3P16-201ENST00000452205 344 ntBASIC3.53□□□□□ -1.84
RFX6Q8HWS3 SNRPFP3-201ENST00000457792 225 ntBASIC3.53□□□□□ -1.84
RFX6Q8HWS3 RPS4XP22-201ENST00000480755 780 ntBASIC3.53□□□□□ -1.84
RFX6Q8HWS3 AC104806.1-201ENST00000508720 308 ntBASIC3.53□□□□□ -1.84
RFX6Q8HWS3 FGF7P4-201ENST00000509595 295 ntBASIC3.53□□□□□ -1.84
RFX6Q8HWS3 TRMT10BP1-201ENST00000519377 943 ntBASIC3.53□□□□□ -1.84
RFX6Q8HWS3 AP006587.4-201ENST00000526053 529 ntBASIC3.53□□□□□ -1.84
RFX6Q8HWS3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.53□□□□□ -1.84
RFX6Q8HWS3 MIR4474-201ENST00000579189 78 ntBASIC3.53□□□□□ -1.84
RFX6Q8HWS3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.53□□□□□ -1.84
RFX6Q8HWS3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.53□□□□□ -1.84
RFX6Q8HWS3 BDH2P1-201ENST00000602288 736 ntBASIC3.53□□□□□ -1.84
RFX6Q8HWS3 AC006557.5-201ENST00000603126 811 ntBASIC3.53□□□□□ -1.84
RFX6Q8HWS3 AL034408.1-202ENST00000636088 415 ntBASIC3.53□□□□□ -1.84
RFX6Q8HWS3 AC009093.8-201ENST00000641769 292 ntBASIC3.53□□□□□ -1.84
RFX6Q8HWS3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
RFX6Q8HWS3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
RFX6Q8HWS3 AL136164.4-201ENST00000625013 2135 ntBASIC3.53□□□□□ -1.84
RFX6Q8HWS3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RFX6Q8HWS3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
RFX6Q8HWS3 AC058791.1-201ENST00000608412 3198 ntBASIC3.53□□□□□ -1.85
RFX6Q8HWS3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RFX6Q8HWS3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RFX6Q8HWS3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
RFX6Q8HWS3 RNU5A-1-201ENST00000362698 116 ntBASIC3.52□□□□□ -1.85
RFX6Q8HWS3 Y_RNA.231-201ENST00000364358 102 ntBASIC3.52□□□□□ -1.85
RFX6Q8HWS3 RNU6-767P-201ENST00000384132 107 ntBASIC3.52□□□□□ -1.85
RFX6Q8HWS3 SNORA36C-201ENST00000384289 132 ntBASIC3.52□□□□□ -1.85
RFX6Q8HWS3 MIR554-201ENST00000384874 96 ntBASIC3.52□□□□□ -1.85
RFX6Q8HWS3 RNU6-332P-201ENST00000391193 108 ntBASIC3.52□□□□□ -1.85
RFX6Q8HWS3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
RFX6Q8HWS3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RFX6Q8HWS3 AL445189.1-201ENST00000405722 338 ntBASIC3.52□□□□□ -1.85
RFX6Q8HWS3 AL356967.1-201ENST00000406305 431 ntBASIC3.52□□□□□ -1.85
RFX6Q8HWS3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.52□□□□□ -1.85
RFX6Q8HWS3 RPL7L1P10-201ENST00000427790 463 ntBASIC3.52□□□□□ -1.85
RFX6Q8HWS3 NEFMP1-201ENST00000443423 1006 ntBASIC3.52□□□□□ -1.85
RFX6Q8HWS3 AC020550.1-201ENST00000447385 163 ntBASIC3.52□□□□□ -1.85
RFX6Q8HWS3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.52□□□□□ -1.85
RFX6Q8HWS3 FABP5P13-201ENST00000452144 328 ntBASIC3.52□□□□□ -1.85
RFX6Q8HWS3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms