Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 OR5AL2P-201ENST00000532185 920 ntBASIC0.63□□□□□ -2.31
CSMD3Q7Z407 AL138976.2-201ENST00000563989 694 ntBASIC0.63□□□□□ -2.31
CSMD3Q7Z407 MIR3609-201ENST00000582661 80 ntBASIC0.63□□□□□ -2.31
CSMD3Q7Z407 AC004808.1-201ENST00000627671 721 ntBASIC0.63□□□□□ -2.31
CSMD3Q7Z407 OR6C66P-201ENST00000414917 930 ntBASIC0.63□□□□□ -2.31
CSMD3Q7Z407 AL353689.1-201ENST00000438895 199 ntBASIC0.63□□□□□ -2.31
CSMD3Q7Z407 AL645638.1-201ENST00000440519 361 ntBASIC0.63□□□□□ -2.31
CSMD3Q7Z407 AC020658.4-201ENST00000613987 684 ntBASIC0.63□□□□□ -2.31
CSMD3Q7Z407 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.63□□□□□ -2.31
CSMD3Q7Z407 Y_RNA.48-201ENST00000362710 103 ntBASIC0.62□□□□□ -2.31
CSMD3Q7Z407 RNU6-263P-201ENST00000363811 107 ntBASIC0.62□□□□□ -2.31
CSMD3Q7Z407 RNA5SP499-201ENST00000363982 119 ntBASIC0.62□□□□□ -2.31
CSMD3Q7Z407 AL136372.1-201ENST00000403060 228 ntBASIC0.62□□□□□ -2.31
CSMD3Q7Z407 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.62□□□□□ -2.31
CSMD3Q7Z407 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.62□□□□□ -2.31
CSMD3Q7Z407 TRAPPC13P1-201ENST00000435991 1062 ntBASIC0.62□□□□□ -2.31
CSMD3Q7Z407 RPS15AP27-201ENST00000449183 343 ntBASIC0.62□□□□□ -2.31
CSMD3Q7Z407 MTATP6P7-201ENST00000453315 681 ntBASIC0.62□□□□□ -2.31
CSMD3Q7Z407 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC0.62□□□□□ -2.31
CSMD3Q7Z407 AP001960.1-201ENST00000506494 658 ntBASIC0.62□□□□□ -2.31
CSMD3Q7Z407 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC0.62□□□□□ -2.31
CSMD3Q7Z407 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.62□□□□□ -2.31
CSMD3Q7Z407 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC0.62□□□□□ -2.31
CSMD3Q7Z407 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.62□□□□□ -2.31
CSMD3Q7Z407 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.62□□□□□ -2.31
CSMD3Q7Z407 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
CSMD3Q7Z407 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.62□□□□□ -2.31
CSMD3Q7Z407 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
CSMD3Q7Z407 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.62□□□□□ -2.31
CSMD3Q7Z407 COL6A4P2-205ENST00000509855 506 ntBASIC0.62□□□□□ -2.31
CSMD3Q7Z407 AC004923.2-201ENST00000529649 369 ntBASIC0.62□□□□□ -2.31
CSMD3Q7Z407 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.62□□□□□ -2.31
CSMD3Q7Z407 AC090616.3-201ENST00000582184 217 ntBASIC0.62□□□□□ -2.31
CSMD3Q7Z407 AC078899.2-201ENST00000595282 212 ntBASIC0.62□□□□□ -2.31
CSMD3Q7Z407 Z69720.2-201ENST00000624755 279 ntBASIC0.62□□□□□ -2.31
CSMD3Q7Z407 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
CSMD3Q7Z407 RPL23AP32-201ENST00000395315 459 ntBASIC0.62□□□□□ -2.31
CSMD3Q7Z407 RNU2-21P-201ENST00000410368 188 ntBASIC0.62□□□□□ -2.31
CSMD3Q7Z407 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC0.62□□□□□ -2.31
CSMD3Q7Z407 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.62□□□□□ -2.31
CSMD3Q7Z407 AL591212.2-201ENST00000433923 257 ntBASIC0.62□□□□□ -2.31
CSMD3Q7Z407 AL627224.1-201ENST00000448334 444 ntBASIC0.62□□□□□ -2.31
CSMD3Q7Z407 MTND2P19-201ENST00000449129 1012 ntBASIC0.62□□□□□ -2.31
CSMD3Q7Z407 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.62□□□□□ -2.31
CSMD3Q7Z407 AC078857.1-201ENST00000469870 667 ntBASIC0.62□□□□□ -2.31
CSMD3Q7Z407 AC015908.1-201ENST00000478739 476 ntBASIC0.62□□□□□ -2.31
CSMD3Q7Z407 MIR3122-201ENST00000577243 73 ntBASIC0.62□□□□□ -2.31
CSMD3Q7Z407 MIR4698-201ENST00000577795 80 ntBASIC0.62□□□□□ -2.31
CSMD3Q7Z407 AL355297.2-201ENST00000604792 129 ntBASIC0.62□□□□□ -2.31
CSMD3Q7Z407 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.62□□□□□ -2.31
CSMD3Q7Z407 MIR6759-201ENST00000638110 65 ntBASIC0.62□□□□□ -2.31
CSMD3Q7Z407 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.62□□□□□ -2.31
CSMD3Q7Z407 Y_RNA.412-201ENST00000384001 104 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 MIR1912-201ENST00000410389 80 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.61□□□□□ -2.31
CSMD3Q7Z407 XKRYP1-201ENST00000423438 492 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 XKRYP2-201ENST00000432915 492 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 AC004854.1-201ENST00000440356 349 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 FAM206BP-201ENST00000510179 541 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 AC115085.1-201ENST00000588924 229 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.61□□□□□ -2.31
CSMD3Q7Z407 AC079395.3-201ENST00000615161 484 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 AC007742.2-201ENST00000618226 398 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
CSMD3Q7Z407 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC0.61□□□□□ -2.31
CSMD3Q7Z407 RNU6-1197P-201ENST00000391183 107 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 SFR1P1-201ENST00000403720 688 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 AL512604.1-201ENST00000404812 257 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 AL356867.1-201ENST00000429623 299 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 OSTCP8-201ENST00000445117 448 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 UBE2Q2P9-201ENST00000490086 202 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.61□□□□□ -2.31
CSMD3Q7Z407 AC091965.2-201ENST00000512324 613 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.61□□□□□ -2.31
CSMD3Q7Z407 SNORA44.1-201ENST00000517031 108 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 AC074051.3-201ENST00000570238 358 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 AC135507.1-201ENST00000607214 561 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC0.61□□□□□ -2.31
CSMD3Q7Z407 AC097372.4-201ENST00000625025 466 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 RNY4P3-201ENST00000365254 95 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 RNU6-821P-201ENST00000390995 107 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 RNU6-244P-201ENST00000391028 104 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 RNU2-41P-201ENST00000410991 178 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.61□□□□□ -2.31
CSMD3Q7Z407 AC024082.2-201ENST00000434771 238 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 AC023512.1-201ENST00000444513 499 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 AC027575.1-201ENST00000481064 460 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 AC026801.1-201ENST00000497178 464 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.61□□□□□ -2.31
CSMD3Q7Z407 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.61□□□□□ -2.31
CSMD3Q7Z407 MIR5571-201ENST00000577998 113 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 AC090666.1-201ENST00000578241 445 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 MIR4723-201ENST00000585070 81 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.61□□□□□ -2.31
CSMD3Q7Z407 AC211469.2-201ENST00000605461 205 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 UCA1.1-201ENST00000620952 75 ntBASIC0.61□□□□□ -2.31
CSMD3Q7Z407 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.61□□□□□ -2.31
CSMD3Q7Z407 MTND5P11-201ENST00000511037 1812 ntBASIC0.6□□□□□ -2.31
CSMD3Q7Z407 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms