Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 MIR98-201ENST00000606724 119 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 AC107294.1-201ENST00000609524 467 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 AL591516.1-201ENST00000611326 274 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 AL365204.3-201ENST00000612448 685 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 AC011939.3-201ENST00000613686 466 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 AC099842.1-201ENST00000619919 596 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 MIR208A-201ENST00000362287 71 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 Y_RNA.194-201ENST00000363985 102 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 RNU6-188P-201ENST00000364207 107 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 Y_RNA.245-201ENST00000364493 95 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 SNORA68.1-201ENST00000364537 132 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 AC104651.1-201ENST00000427559 735 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 AC009969.1-201ENST00000438726 172 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 BX510359.1-201ENST00000456973 237 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 RNU6-953P-201ENST00000459154 107 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 snoU13.22-201ENST00000459428 104 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 RPL36AP51-201ENST00000487216 318 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 RPS15AP34-201ENST00000487776 387 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 MTCO3P7-201ENST00000510008 774 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 RNU1-143P-201ENST00000516296 146 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 RNA5SP471-201ENST00000516971 106 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 RNU6-1220P-201ENST00000517126 108 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 AC068657.1-201ENST00000520807 306 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 COX6CP5-201ENST00000527162 228 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 MIR5004-201ENST00000579078 107 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 MIR5195-201ENST00000583555 115 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 HMGN2P15-201ENST00000585707 270 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 YPEL5P2-201ENST00000605553 359 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 AC098614.4-201ENST00000607601 462 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 U1.23-201ENST00000610293 146 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 AC091834.1-201ENST00000614543 472 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 RNU1-68P-201ENST00000615382 146 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 U1.39-201ENST00000621562 146 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 AC018692.3-201ENST00000623929 123 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 AC091903.1-201ENST00000624322 454 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 MTND5P29-201ENST00000458676 1807 ntBASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NUP54Q7Z3B4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 UBE2L2-201ENST00000254302 429 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 RN7SKP226-201ENST00000364912 300 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 RNU6-946P-201ENST00000383878 107 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 Y_RNA.436-201ENST00000384097 102 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 AL122016.1-201ENST00000403365 367 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 AL513475.1-201ENST00000406602 315 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 RPL19P1-201ENST00000411635 428 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 MORF4L1P6-201ENST00000418771 268 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 ELOCP14-201ENST00000428070 331 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 AC093106.2-201ENST00000428212 385 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 AC133104.1-201ENST00000429100 218 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 HMGB1P9-201ENST00000429856 646 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 RPS15AP7-201ENST00000439294 405 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 ELOCP7-201ENST00000439968 331 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 AC079781.2-201ENST00000446424 169 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 AC079448.1-201ENST00000449377 373 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 TPT1P7-201ENST00000458300 517 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 RN7SL863P-201ENST00000462370 296 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 RPL23AP70-201ENST00000483361 460 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 SCARNA24.1-201ENST00000516465 137 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 AC011471.1-201ENST00000585766 187 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 AC087683.1-201ENST00000591187 441 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 AC073648.5-201ENST00000603502 305 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 uc_338.25-201ENST00000613756 156 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 MTND5P42-201ENST00000637720 498 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 MIR622-201ENST00000638396 96 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 AL359693.1-201ENST00000614959 2407 ntBASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms