Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.98□□□□□ -1.93
C9orf139Q6ZV77 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC2.98□□□□□ -1.93
C9orf139Q6ZV77 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.98□□□□□ -1.93
C9orf139Q6ZV77 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.98□□□□□ -1.93
C9orf139Q6ZV77 MIR4644-201ENST00000579929 84 ntBASIC2.98□□□□□ -1.93
C9orf139Q6ZV77 BNIP3P25-201ENST00000596023 559 ntBASIC2.98□□□□□ -1.93
C9orf139Q6ZV77 AC244505.7-201ENST00000599675 272 ntBASIC2.98□□□□□ -1.93
C9orf139Q6ZV77 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.98□□□□□ -1.93
C9orf139Q6ZV77 AL050343.2-201ENST00000607338 280 ntBASIC2.98□□□□□ -1.93
C9orf139Q6ZV77 AC012409.4-201ENST00000612923 249 ntBASIC2.98□□□□□ -1.93
C9orf139Q6ZV77 SDR42E1P2-201ENST00000614861 481 ntBASIC2.98□□□□□ -1.93
C9orf139Q6ZV77 AC007998.5-201ENST00000622938 237 ntBASIC2.98□□□□□ -1.93
C9orf139Q6ZV77 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.98□□□□□ -1.93
C9orf139Q6ZV77 AC118273.1-201ENST00000525324 3006 ntBASIC2.98□□□□□ -1.93
C9orf139Q6ZV77 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
C9orf139Q6ZV77 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
C9orf139Q6ZV77 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.98□□□□□ -1.93
C9orf139Q6ZV77 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC2.98□□□□□ -1.93
C9orf139Q6ZV77 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
C9orf139Q6ZV77 AC010733.2-201ENST00000589496 5702 ntBASIC2.98□□□□□ -1.93
C9orf139Q6ZV77 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.98□□□□□ -1.93
C9orf139Q6ZV77 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
C9orf139Q6ZV77 MTCO1P12-201ENST00000414273 1543 ntBASIC2.98□□□□□ -1.93
C9orf139Q6ZV77 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 PRO1804-201ENST00000623780 2050 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 MAPK10-253ENST00000641010 4072 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 Y_RNA.67-201ENST00000362870 100 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 RNU6-116P-201ENST00000384042 109 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 AL592114.1-201ENST00000403842 483 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 RNA5SP129-201ENST00000410276 118 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 AL451054.2-201ENST00000420896 202 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 FABP5P13-201ENST00000452144 328 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 RBMY2UP-201ENST00000453474 324 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 HMGN2P16-201ENST00000456802 261 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 PPP1R2P5-201ENST00000457256 603 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 RPL21P8-201ENST00000465083 535 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 Y_RNA.691-201ENST00000516611 103 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 Y_RNA.701-201ENST00000516812 110 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 AC005668.1-201ENST00000571142 476 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 AC005498.1-201ENST00000592125 465 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 AC016727.1-205ENST00000605437 569 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 AC096577.2-201ENST00000611455 153 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 AL365204.3-201ENST00000612448 685 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 DUSP12P1-201ENST00000612874 516 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 AL360181.4-201ENST00000621752 134 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 TEX41-265ENST00000627785 704 ntTSL 5 BASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 AL356274.2-201ENST00000624379 3752 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 AC073346.2-201ENST00000624724 2058 ntBASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC2.97□□□□□ -1.93
C9orf139Q6ZV77 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
C9orf139Q6ZV77 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
C9orf139Q6ZV77 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 SNORD9-201ENST00000362566 104 ntBASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 Y_RNA.301-201ENST00000364990 103 ntBASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 XGY1-201ENST00000381172 446 ntBASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 RNU6-1127P-201ENST00000384580 107 ntBASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 Y_RNA.530-201ENST00000384587 101 ntBASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 AL138878.1-201ENST00000405131 347 ntBASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 FAT1P1-201ENST00000406588 507 ntBASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 ARL5AP1-201ENST00000418991 388 ntBASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 AC007677.1-201ENST00000445757 515 ntBASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 SCARNA18-201ENST00000459004 134 ntBASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 AC004801.2-202ENST00000463559 283 ntBASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 Y_RNA.654-201ENST00000497848 106 ntBASIC2.96□□□□□ -1.94
C9orf139Q6ZV77 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms