Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC073343.1-201ENST00000328239 651 ntBASIC2.73□□□□□ -1.97
C11orf88Q6PI97 RNA5SP197-201ENST00000363357 119 ntBASIC2.73□□□□□ -1.97
C11orf88Q6PI97 MIR490-201ENST00000384865 128 ntBASIC2.73□□□□□ -1.97
C11orf88Q6PI97 AL357075.1-201ENST00000404107 726 ntBASIC2.73□□□□□ -1.97
C11orf88Q6PI97 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.73□□□□□ -1.97
C11orf88Q6PI97 AC009518.2-201ENST00000418056 731 ntBASIC2.73□□□□□ -1.97
C11orf88Q6PI97 AL133217.1-201ENST00000450980 425 ntBASIC2.73□□□□□ -1.97
C11orf88Q6PI97 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.73□□□□□ -1.97
C11orf88Q6PI97 AC004263.1-201ENST00000479327 332 ntBASIC2.73□□□□□ -1.97
C11orf88Q6PI97 AC007182.2-201ENST00000489251 402 ntBASIC2.73□□□□□ -1.97
C11orf88Q6PI97 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.73□□□□□ -1.97
C11orf88Q6PI97 MRPS33P3-201ENST00000513456 322 ntBASIC2.73□□□□□ -1.97
C11orf88Q6PI97 RN7SKP43-201ENST00000516173 320 ntBASIC2.73□□□□□ -1.97
C11orf88Q6PI97 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.73□□□□□ -1.97
C11orf88Q6PI97 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.73□□□□□ -1.97
C11orf88Q6PI97 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
C11orf88Q6PI97 CYCSP39-201ENST00000565821 309 ntBASIC2.73□□□□□ -1.97
C11orf88Q6PI97 NRBF2P1-201ENST00000587407 859 ntBASIC2.73□□□□□ -1.97
C11orf88Q6PI97 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
C11orf88Q6PI97 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.73□□□□□ -1.97
C11orf88Q6PI97 CKS1BP3-201ENST00000600888 237 ntBASIC2.73□□□□□ -1.97
C11orf88Q6PI97 AC008121.1-201ENST00000603244 268 ntBASIC2.73□□□□□ -1.97
C11orf88Q6PI97 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
C11orf88Q6PI97 AC079248.2-201ENST00000623779 326 ntBASIC2.73□□□□□ -1.97
C11orf88Q6PI97 MIR3651-201ENST00000630427 90 ntBASIC2.73□□□□□ -1.97
C11orf88Q6PI97 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.73□□□□□ -1.97
C11orf88Q6PI97 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.73□□□□□ -1.97
C11orf88Q6PI97 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.72□□□□□ -1.97
C11orf88Q6PI97 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
C11orf88Q6PI97 AL137003.2-201ENST00000606924 2538 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
C11orf88Q6PI97 HSPE1P11-201ENST00000339579 310 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
C11orf88Q6PI97 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.72□□□□□ -1.97
C11orf88Q6PI97 RNU6-641P-201ENST00000384006 107 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 RNU6-39P-201ENST00000384344 107 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 MIR634-201ENST00000385208 97 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 AL139095.1-201ENST00000404326 391 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 AL133475.1-201ENST00000404414 305 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 RNU4-47P-201ENST00000410876 114 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 Z92545.1-201ENST00000411782 234 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 AC096664.2-201ENST00000411843 406 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 AL109913.1-201ENST00000421173 514 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 BX276092.3-201ENST00000424182 230 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 AL078601.1-201ENST00000444542 271 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
C11orf88Q6PI97 AC026801.1-201ENST00000497178 464 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.72□□□□□ -1.97
C11orf88Q6PI97 AC116655.1-201ENST00000508324 901 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.72□□□□□ -1.97
C11orf88Q6PI97 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.72□□□□□ -1.97
C11orf88Q6PI97 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.72□□□□□ -1.97
C11orf88Q6PI97 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.72□□□□□ -1.97
C11orf88Q6PI97 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.72□□□□□ -1.97
C11orf88Q6PI97 IGKV2-26-201ENST00000518305 343 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.72□□□□□ -1.97
C11orf88Q6PI97 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.72□□□□□ -1.97
C11orf88Q6PI97 AC022878.1-201ENST00000530684 149 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 AC010186.2-204ENST00000537668 439 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.72□□□□□ -1.97
C11orf88Q6PI97 AL157871.3-201ENST00000557231 293 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 AC007938.3-201ENST00000604965 623 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 AC073657.2-201ENST00000605661 303 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 AP002360.4-201ENST00000606980 481 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 AL359854.1-201ENST00000614203 1594 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 AC024940.5-201ENST00000622889 474 ntBASIC2.72□□□□□ -1.97
C11orf88Q6PI97 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
C11orf88Q6PI97 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.72□□□□□ -1.97
C11orf88Q6PI97 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
C11orf88Q6PI97 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
C11orf88Q6PI97 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
C11orf88Q6PI97 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
C11orf88Q6PI97 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
C11orf88Q6PI97 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.97
C11orf88Q6PI97 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
C11orf88Q6PI97 AC093536.2-201ENST00000565257 1406 ntBASIC2.71□□□□□ -1.98
C11orf88Q6PI97 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
C11orf88Q6PI97 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
C11orf88Q6PI97 RNU5E-1-201ENST00000362477 120 ntBASIC2.71□□□□□ -1.98
C11orf88Q6PI97 Y_RNA.33-201ENST00000362591 102 ntBASIC2.71□□□□□ -1.98
C11orf88Q6PI97 RNU6-553P-201ENST00000364047 96 ntBASIC2.71□□□□□ -1.98
C11orf88Q6PI97 RNY1P12-201ENST00000364251 105 ntBASIC2.71□□□□□ -1.98
C11orf88Q6PI97 Z98749.2-208ENST00000381646 500 ntBASIC2.71□□□□□ -1.98
C11orf88Q6PI97 Y_RNA.534-201ENST00000384599 112 ntBASIC2.71□□□□□ -1.98
C11orf88Q6PI97 AL031577.2-201ENST00000404133 280 ntBASIC2.71□□□□□ -1.98
C11orf88Q6PI97 Y_RNA.598-201ENST00000410480 95 ntBASIC2.71□□□□□ -1.98
C11orf88Q6PI97 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.71□□□□□ -1.98
C11orf88Q6PI97 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.71□□□□□ -1.98
C11orf88Q6PI97 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.71□□□□□ -1.98
C11orf88Q6PI97 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.71□□□□□ -1.98
C11orf88Q6PI97 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.71□□□□□ -1.98
C11orf88Q6PI97 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.71□□□□□ -1.98
C11orf88Q6PI97 AC133134.1-201ENST00000466800 359 ntBASIC2.71□□□□□ -1.98
C11orf88Q6PI97 AC023194.1-201ENST00000493084 308 ntBASIC2.71□□□□□ -1.98
C11orf88Q6PI97 FAM92A1P2-202ENST00000504766 877 ntBASIC2.71□□□□□ -1.98
C11orf88Q6PI97 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
C11orf88Q6PI97 AC109927.2-201ENST00000506416 303 ntBASIC2.71□□□□□ -1.98
C11orf88Q6PI97 RPL37P25-201ENST00000507308 276 ntBASIC2.71□□□□□ -1.98
C11orf88Q6PI97 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms