Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.19□□□□□ -1.74
KRT40Q6A162 AL161713.1-201ENST00000555538 145 ntBASIC4.19□□□□□ -1.74
KRT40Q6A162 AC124303.1-201ENST00000605703 360 ntBASIC4.19□□□□□ -1.74
KRT40Q6A162 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.19□□□□□ -1.74
KRT40Q6A162 SNHG22-203ENST00000617833 660 ntBASIC4.19□□□□□ -1.74
KRT40Q6A162 AC090971.5-201ENST00000621102 293 ntBASIC4.19□□□□□ -1.74
KRT40Q6A162 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.19□□□□□ -1.74
KRT40Q6A162 TPTE2P4-201ENST00000258589 1605 ntBASIC4.19□□□□□ -1.74
KRT40Q6A162 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
KRT40Q6A162 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
KRT40Q6A162 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRT40Q6A162 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
KRT40Q6A162 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
KRT40Q6A162 RNU6-1155P-201ENST00000363554 107 ntBASIC4.18□□□□□ -1.74
KRT40Q6A162 RNA5SP51-201ENST00000364750 119 ntBASIC4.18□□□□□ -1.74
KRT40Q6A162 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.18□□□□□ -1.74
KRT40Q6A162 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.18□□□□□ -1.74
KRT40Q6A162 RNU6-946P-201ENST00000383878 107 ntBASIC4.18□□□□□ -1.74
KRT40Q6A162 RNU6-1127P-201ENST00000384580 107 ntBASIC4.18□□□□□ -1.74
KRT40Q6A162 RNU6-1304P-201ENST00000411374 106 ntBASIC4.18□□□□□ -1.74
KRT40Q6A162 AC096664.2-201ENST00000411843 406 ntBASIC4.18□□□□□ -1.74
KRT40Q6A162 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.18□□□□□ -1.74
KRT40Q6A162 RPL30P2-201ENST00000414021 291 ntBASIC4.18□□□□□ -1.74
KRT40Q6A162 SSXP9-201ENST00000417503 292 ntBASIC4.18□□□□□ -1.74
KRT40Q6A162 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
KRT40Q6A162 AL590399.6-201ENST00000446396 307 ntBASIC4.18□□□□□ -1.74
KRT40Q6A162 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.18□□□□□ -1.74
KRT40Q6A162 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.18□□□□□ -1.74
KRT40Q6A162 AL645939.1-201ENST00000453429 797 ntBASIC4.18□□□□□ -1.74
KRT40Q6A162 AC004801.2-202ENST00000463559 283 ntBASIC4.18□□□□□ -1.74
KRT40Q6A162 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.18□□□□□ -1.74
KRT40Q6A162 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.18□□□□□ -1.74
KRT40Q6A162 RNU6-273P-201ENST00000516937 96 ntBASIC4.18□□□□□ -1.74
KRT40Q6A162 RNU6-685P-201ENST00000517088 95 ntBASIC4.18□□□□□ -1.74
KRT40Q6A162 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.18□□□□□ -1.74
KRT40Q6A162 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.18□□□□□ -1.74
KRT40Q6A162 OR11H5P-201ENST00000554039 926 ntBASIC4.18□□□□□ -1.74
KRT40Q6A162 AL163153.1-201ENST00000554223 283 ntBASIC4.18□□□□□ -1.74
KRT40Q6A162 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.18□□□□□ -1.74
KRT40Q6A162 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.18□□□□□ -1.74
KRT40Q6A162 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.18□□□□□ -1.74
KRT40Q6A162 SNRPGP17-201ENST00000603780 214 ntBASIC4.18□□□□□ -1.74
KRT40Q6A162 AC243312.2-201ENST00000623340 601 ntBASIC4.18□□□□□ -1.74
KRT40Q6A162 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.18□□□□□ -1.74
KRT40Q6A162 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.18□□□□□ -1.74
KRT40Q6A162 AC119674.1-207ENST00000641355 633 ntBASIC4.18□□□□□ -1.74
KRT40Q6A162 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRT40Q6A162 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
KRT40Q6A162 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.18□□□□□ -1.74
KRT40Q6A162 AC103710.2-202ENST00000641454 2853 ntBASIC4.18□□□□□ -1.74
KRT40Q6A162 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
KRT40Q6A162 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRT40Q6A162 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
KRT40Q6A162 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
KRT40Q6A162 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
KRT40Q6A162 AP001350.1-201ENST00000601906 1524 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRT40Q6A162 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRT40Q6A162 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRT40Q6A162 RNU6-1287P-201ENST00000362914 107 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 RNU6-1297P-201ENST00000384415 104 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 RNU6-738P-201ENST00000384531 106 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 RNU6-1060P-201ENST00000384664 107 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 RNU4-46P-201ENST00000410818 138 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 POLHP1-201ENST00000411806 470 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.17□□□□□ -1.74
KRT40Q6A162 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.17□□□□□ -1.74
KRT40Q6A162 BEND7P1-201ENST00000422058 457 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 AL158156.1-201ENST00000422509 473 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 AC002075.2-201ENST00000425207 252 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 AC097713.2-201ENST00000430199 356 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 FTH1P6-201ENST00000430768 320 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.17□□□□□ -1.74
KRT40Q6A162 RPL23AP33-201ENST00000442301 452 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 RPS15AP27-201ENST00000449183 343 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.17□□□□□ -1.74
KRT40Q6A162 RNU7-152P-201ENST00000458982 64 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 AC084357.1-201ENST00000473404 255 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 RN7SL432P-201ENST00000484057 298 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 MTND5P5-201ENST00000503764 376 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 HMGB3P15-201ENST00000507326 574 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 RNU6-1095P-201ENST00000516148 108 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.17□□□□□ -1.74
KRT40Q6A162 RPL23AP84-201ENST00000571193 464 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 MIR4738-201ENST00000579134 87 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 AC006077.1-201ENST00000604746 343 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 AL034351.1-201ENST00000605288 668 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 AC116312.1-201ENST00000606841 314 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 AL133215.3-201ENST00000609801 448 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 AC084781.2-201ENST00000615568 161 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 MIR6130-201ENST00000619419 109 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.17□□□□□ -1.74
KRT40Q6A162 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
KRT40Q6A162 ZNF33CP-201ENST00000432492 2030 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 CEP170P1-201ENST00000502249 4587 ntBASIC4.17□□□□□ -1.74
KRT40Q6A162 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
KRT40Q6A162 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRT40Q6A162 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
KRT40Q6A162 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
KRT40Q6A162 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms