Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 AL627309.6-201ENST00000606857 840 ntBASIC3.42□□□□□ -1.86
CCDC30Q5VVM6 AC069234.5-201ENST00000611056 416 ntBASIC3.42□□□□□ -1.86
CCDC30Q5VVM6 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC30Q5VVM6 AC099654.7-201ENST00000635788 2127 ntBASIC3.42□□□□□ -1.86
CCDC30Q5VVM6 AP003399.1-201ENST00000637534 361 ntBASIC3.42□□□□□ -1.86
CCDC30Q5VVM6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC30Q5VVM6 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC30Q5VVM6 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 RNY3P10-201ENST00000384764 102 ntBASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 RPL23AP32-201ENST00000395315 459 ntBASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 RNU2-36P-201ENST00000410361 191 ntBASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 HMGN1P14-201ENST00000412459 517 ntBASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 RPL7P10-201ENST00000417407 739 ntBASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 BTF3L4P3-201ENST00000418879 476 ntBASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 AL589872.1-201ENST00000426602 288 ntBASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 ISCA1P1-201ENST00000426679 387 ntBASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 AC010153.1-201ENST00000432862 727 ntBASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 AC236972.1-201ENST00000433225 199 ntBASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 NEFMP1-201ENST00000443423 1006 ntBASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 DDX3P2-201ENST00000446138 111 ntBASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 SNRPGP9-201ENST00000456025 225 ntBASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 snoU109.1-201ENST00000459339 135 ntBASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 AL391261.3-201ENST00000557194 520 ntBASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 MIR3682-201ENST00000581338 84 ntBASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 AC174048.1-201ENST00000603389 144 ntBASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 AL358072.1-201ENST00000604156 575 ntBASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 AC091304.9-201ENST00000612091 226 ntBASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 AC068880.5-201ENST00000624331 290 ntBASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CCDC30Q5VVM6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC30Q5VVM6 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC30Q5VVM6 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC30Q5VVM6 UBE2L2-201ENST00000254302 429 ntBASIC3.4□□□□□ -1.87
CCDC30Q5VVM6 RNU6-14P-201ENST00000384630 106 ntBASIC3.4□□□□□ -1.87
CCDC30Q5VVM6 MIR196B-201ENST00000384852 84 ntBASIC3.4□□□□□ -1.87
CCDC30Q5VVM6 MIR181B1-201ENST00000385240 110 ntBASIC3.4□□□□□ -1.87
CCDC30Q5VVM6 UBE2V1P2-201ENST00000397758 440 ntBASIC3.4□□□□□ -1.87
CCDC30Q5VVM6 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC30Q5VVM6 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC30Q5VVM6 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC30Q5VVM6 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC30Q5VVM6 AC098826.1-201ENST00000433943 471 ntBASIC3.4□□□□□ -1.87
CCDC30Q5VVM6 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.4□□□□□ -1.87
CCDC30Q5VVM6 FABP5P15-201ENST00000453566 214 ntBASIC3.4□□□□□ -1.87
CCDC30Q5VVM6 RNU6-953P-201ENST00000459154 107 ntBASIC3.4□□□□□ -1.87
CCDC30Q5VVM6 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
CCDC30Q5VVM6 AC114786.4-201ENST00000508771 728 ntBASIC3.4□□□□□ -1.87
CCDC30Q5VVM6 RNU7-51P-201ENST00000516560 62 ntBASIC3.4□□□□□ -1.87
CCDC30Q5VVM6 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC30Q5VVM6 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC30Q5VVM6 AC012119.1-201ENST00000603184 222 ntBASIC3.4□□□□□ -1.87
CCDC30Q5VVM6 AC104763.2-201ENST00000604179 382 ntBASIC3.4□□□□□ -1.87
CCDC30Q5VVM6 AL365204.3-201ENST00000612448 685 ntBASIC3.4□□□□□ -1.87
CCDC30Q5VVM6 CR381653.2-201ENST00000624041 768 ntBASIC3.4□□□□□ -1.87
CCDC30Q5VVM6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 RNU1-105P-201ENST00000363470 161 ntBASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 RPS3AP3-201ENST00000411933 242 ntBASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 AC009518.2-201ENST00000418056 731 ntBASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 SNORD42A-201ENST00000459584 64 ntBASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 UBE2DNL-203ENST00000474922 222 ntBASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 AC233702.1-201ENST00000482905 502 ntBASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 RNA5SP282-201ENST00000516355 108 ntBASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 RNA5SP471-201ENST00000516971 106 ntBASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 AC060788.1-201ENST00000521318 469 ntBASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 MIR4635-201ENST00000583759 79 ntBASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 AC005771.1-201ENST00000585581 349 ntBASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 AC007363.1-201ENST00000604736 620 ntBASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC30Q5VVM6 RNU5E-1-201ENST00000362477 120 ntBASIC3.38□□□□□ -1.87
CCDC30Q5VVM6 RPS4XP8-201ENST00000402039 771 ntBASIC3.38□□□□□ -1.87
CCDC30Q5VVM6 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC30Q5VVM6 GPM6BP2-201ENST00000432046 144 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms