Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.54□□□□□ -1.84
CCDC38Q502W7 AC016957.1-201ENST00000534895 309 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC38Q502W7 AL157871.3-201ENST00000557231 293 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC38Q502W7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC38Q502W7 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC38Q502W7 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CCDC38Q502W7 AC004852.3-201ENST00000614131 326 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC38Q502W7 SNORD39.4-201ENST00000620099 78 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC38Q502W7 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC38Q502W7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC38Q502W7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC38Q502W7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC38Q502W7 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
CCDC38Q502W7 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
CCDC38Q502W7 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC38Q502W7 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC38Q502W7 OR4G2P-201ENST00000328113 903 ntBASIC3.53□□□□□ -1.84
CCDC38Q502W7 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC38Q502W7 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC38Q502W7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CCDC38Q502W7 RNU6-192P-201ENST00000391253 100 ntBASIC3.53□□□□□ -1.84
CCDC38Q502W7 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC38Q502W7 AC068050.1-201ENST00000394891 380 ntBASIC3.53□□□□□ -1.84
CCDC38Q502W7 CALM2P3-201ENST00000400429 449 ntBASIC3.53□□□□□ -1.84
CCDC38Q502W7 NDUFS5P4-201ENST00000412983 318 ntBASIC3.53□□□□□ -1.84
CCDC38Q502W7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC38Q502W7 UBE2V1P10-201ENST00000414685 269 ntBASIC3.53□□□□□ -1.84
CCDC38Q502W7 AC063979.1-201ENST00000415539 377 ntBASIC3.53□□□□□ -1.84
CCDC38Q502W7 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC38Q502W7 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC38Q502W7 RPL21P40-201ENST00000428586 483 ntBASIC3.53□□□□□ -1.84
CCDC38Q502W7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC38Q502W7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC38Q502W7 AL133547.1-201ENST00000448546 220 ntBASIC3.53□□□□□ -1.84
CCDC38Q502W7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC38Q502W7 RPL26P9-201ENST00000457466 433 ntBASIC3.53□□□□□ -1.84
CCDC38Q502W7 AL162395.1-201ENST00000457882 422 ntBASIC3.53□□□□□ -1.84
CCDC38Q502W7 AC091179.1-201ENST00000461606 579 ntBASIC3.53□□□□□ -1.84
CCDC38Q502W7 GMFBP1-201ENST00000467831 427 ntBASIC3.53□□□□□ -1.84
CCDC38Q502W7 AC139453.3-201ENST00000493276 369 ntBASIC3.53□□□□□ -1.84
CCDC38Q502W7 EIF4EP3-201ENST00000498782 656 ntBASIC3.53□□□□□ -1.84
CCDC38Q502W7 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.53□□□□□ -1.84
CCDC38Q502W7 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC38Q502W7 MTND4LP22-201ENST00000508209 276 ntBASIC3.53□□□□□ -1.84
CCDC38Q502W7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC38Q502W7 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.53□□□□□ -1.84
CCDC38Q502W7 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC38Q502W7 MIR4703-201ENST00000577728 79 ntBASIC3.53□□□□□ -1.84
CCDC38Q502W7 AL138889.2-201ENST00000603883 242 ntBASIC3.53□□□□□ -1.84
CCDC38Q502W7 AC012468.1-201ENST00000604888 430 ntBASIC3.53□□□□□ -1.84
CCDC38Q502W7 AC008945.2-201ENST00000606056 604 ntBASIC3.53□□□□□ -1.84
CCDC38Q502W7 AC126118.1-201ENST00000607744 628 ntBASIC3.53□□□□□ -1.84
CCDC38Q502W7 AC068792.1-201ENST00000621354 417 ntBASIC3.53□□□□□ -1.84
CCDC38Q502W7 AC024940.5-201ENST00000622889 474 ntBASIC3.53□□□□□ -1.84
CCDC38Q502W7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC38Q502W7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.85
CCDC38Q502W7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
CCDC38Q502W7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC38Q502W7 MTND4P35-201ENST00000604257 1375 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC38Q502W7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC38Q502W7 RNU6-1085P-201ENST00000363576 107 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 RNU6-1322P-201ENST00000364309 107 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 RNU6-395P-201ENST00000365662 106 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 RNU1-73P-201ENST00000383971 164 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 Y_RNA.409-201ENST00000383990 98 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 Y_RNA.516-201ENST00000384541 124 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 RNU6-550P-201ENST00000391057 101 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 RNA5SP171-201ENST00000391071 115 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 RNU6-1158P-201ENST00000391167 107 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 RN7SKP123-201ENST00000410732 291 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 USP9YP6-201ENST00000413550 854 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC38Q502W7 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC38Q502W7 RPL7P46-201ENST00000425129 740 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 SKA2P1-201ENST00000425592 390 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 MTCO3P30-201ENST00000426425 670 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 HMGB1P9-201ENST00000429856 646 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC38Q502W7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC38Q502W7 CYCSP32-201ENST00000440548 321 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 BRK1P2-201ENST00000442875 223 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 RPL37P4-201ENST00000448908 268 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC38Q502W7 MTATP6P7-201ENST00000453315 681 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 RPL21P8-201ENST00000465083 535 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 AC104472.2-201ENST00000469035 601 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 AC026801.1-201ENST00000497178 464 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 AC009646.1-201ENST00000510455 318 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 RNU1-95P-201ENST00000516357 160 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 RNU1-103P-201ENST00000516502 125 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 RNU1-128P-201ENST00000516704 160 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 RNU6-703P-201ENST00000516946 107 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 PSMA2P1-201ENST00000526365 646 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 AC104383.1-201ENST00000530297 370 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 DNAJC8P1-201ENST00000554535 372 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms