Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 PRPS1P1-201ENST00000445305 876 ntBASIC0.72□□□□□ -2.29
HMGN3Q15651 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.72□□□□□ -2.29
HMGN3Q15651 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.72□□□□□ -2.29
HMGN3Q15651 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.72□□□□□ -2.29
HMGN3Q15651 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC0.72□□□□□ -2.29
HMGN3Q15651 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
HMGN3Q15651 ARL2BPP4-201ENST00000506854 471 ntBASIC0.72□□□□□ -2.29
HMGN3Q15651 AL359273.1-201ENST00000510918 627 ntBASIC0.72□□□□□ -2.29
HMGN3Q15651 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.72□□□□□ -2.29
HMGN3Q15651 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC0.72□□□□□ -2.29
HMGN3Q15651 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC0.72□□□□□ -2.29
HMGN3Q15651 AC012435.1-202ENST00000568772 240 ntBASIC0.72□□□□□ -2.29
HMGN3Q15651 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.72□□□□□ -2.29
HMGN3Q15651 NIFKP6-201ENST00000598115 845 ntBASIC0.72□□□□□ -2.29
HMGN3Q15651 FAM71BP1-201ENST00000604431 523 ntBASIC0.72□□□□□ -2.29
HMGN3Q15651 AL138478.1-201ENST00000612252 832 ntBASIC0.72□□□□□ -2.29
HMGN3Q15651 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.72□□□□□ -2.29
HMGN3Q15651 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
HMGN3Q15651 AC091895.1-201ENST00000624494 256 ntBASIC0.72□□□□□ -2.29
HMGN3Q15651 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
HMGN3Q15651 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.71□□□□□ -2.3
HMGN3Q15651 Y_RNA.67-201ENST00000362870 100 ntBASIC0.71□□□□□ -2.3
HMGN3Q15651 RNU6-392P-201ENST00000364926 101 ntBASIC0.71□□□□□ -2.3
HMGN3Q15651 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.71□□□□□ -2.3
HMGN3Q15651 MIR515-2-201ENST00000384883 83 ntBASIC0.71□□□□□ -2.3
HMGN3Q15651 MIR515-1-201ENST00000384884 83 ntBASIC0.71□□□□□ -2.3
HMGN3Q15651 FGF7P8-201ENST00000402994 292 ntBASIC0.71□□□□□ -2.3
HMGN3Q15651 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.71□□□□□ -2.3
HMGN3Q15651 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.71□□□□□ -2.3
HMGN3Q15651 RPS15AP5-201ENST00000436276 388 ntBASIC0.71□□□□□ -2.3
HMGN3Q15651 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.71□□□□□ -2.3
HMGN3Q15651 AC092473.1-201ENST00000441098 221 ntBASIC0.71□□□□□ -2.3
HMGN3Q15651 AC009238.1-201ENST00000442165 424 ntBASIC0.71□□□□□ -2.3
HMGN3Q15651 AC009237.6-201ENST00000446969 424 ntBASIC0.71□□□□□ -2.3
HMGN3Q15651 AL590365.1-201ENST00000450788 243 ntBASIC0.71□□□□□ -2.3
HMGN3Q15651 AC005908.1-201ENST00000468701 347 ntBASIC0.71□□□□□ -2.3
HMGN3Q15651 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.71□□□□□ -2.3
HMGN3Q15651 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.71□□□□□ -2.3
HMGN3Q15651 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.71□□□□□ -2.3
HMGN3Q15651 RNA5SP458-201ENST00000516188 119 ntBASIC0.71□□□□□ -2.3
HMGN3Q15651 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.71□□□□□ -2.3
HMGN3Q15651 AL049870.4-201ENST00000555741 486 ntBASIC0.71□□□□□ -2.3
HMGN3Q15651 AP001269.3-201ENST00000588718 329 ntBASIC0.71□□□□□ -2.3
HMGN3Q15651 AL138963.2-201ENST00000605137 226 ntBASIC0.71□□□□□ -2.3
HMGN3Q15651 AC097504.2-201ENST00000608088 454 ntBASIC0.71□□□□□ -2.3
HMGN3Q15651 AC008498.1-201ENST00000613012 531 ntBASIC0.71□□□□□ -2.3
HMGN3Q15651 AL512506.2-201ENST00000624472 458 ntBASIC0.71□□□□□ -2.3
HMGN3Q15651 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC0.7□□□□□ -2.3
HMGN3Q15651 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
HMGN3Q15651 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.7□□□□□ -2.3
HMGN3Q15651 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.7□□□□□ -2.3
HMGN3Q15651 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.7□□□□□ -2.3
HMGN3Q15651 RPS20P22-201ENST00000473700 357 ntBASIC0.7□□□□□ -2.3
HMGN3Q15651 RPS23P4-201ENST00000487908 423 ntBASIC0.7□□□□□ -2.3
HMGN3Q15651 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.7□□□□□ -2.3
HMGN3Q15651 RNU6-351P-201ENST00000516097 100 ntBASIC0.7□□□□□ -2.3
HMGN3Q15651 RNU6-991P-201ENST00000516168 107 ntBASIC0.7□□□□□ -2.3
HMGN3Q15651 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.7□□□□□ -2.3
HMGN3Q15651 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.7□□□□□ -2.3
HMGN3Q15651 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.7□□□□□ -2.3
HMGN3Q15651 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.7□□□□□ -2.3
HMGN3Q15651 OR8K4P-201ENST00000534608 872 ntBASIC0.7□□□□□ -2.3
HMGN3Q15651 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.7□□□□□ -2.3
HMGN3Q15651 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC0.7□□□□□ -2.3
HMGN3Q15651 AL731537.2-201ENST00000561565 951 ntBASIC0.7□□□□□ -2.3
HMGN3Q15651 AC104984.5-201ENST00000586878 94 ntBASIC0.7□□□□□ -2.3
HMGN3Q15651 FAM60CP-201ENST00000591086 664 ntBASIC0.7□□□□□ -2.3
HMGN3Q15651 AC010615.3-201ENST00000597319 394 ntBASIC0.7□□□□□ -2.3
HMGN3Q15651 AC079791.1-201ENST00000605356 973 ntBASIC0.7□□□□□ -2.3
HMGN3Q15651 AC055876.5-201ENST00000605667 259 ntBASIC0.7□□□□□ -2.3
HMGN3Q15651 BX322635.1-201ENST00000605804 496 ntBASIC0.7□□□□□ -2.3
HMGN3Q15651 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.7□□□□□ -2.3
HMGN3Q15651 MIR6857-201ENST00000613267 93 ntBASIC0.7□□□□□ -2.3
HMGN3Q15651 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.7□□□□□ -2.3
HMGN3Q15651 ICE2P2-201ENST00000483823 2787 ntBASIC0.69□□□□□ -2.3
HMGN3Q15651 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
HMGN3Q15651 RNU6-1080P-201ENST00000383982 107 ntBASIC0.69□□□□□ -2.3
HMGN3Q15651 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC0.69□□□□□ -2.3
HMGN3Q15651 AL136133.1-201ENST00000413694 376 ntBASIC0.69□□□□□ -2.3
HMGN3Q15651 AC008850.1-201ENST00000427546 362 ntBASIC0.69□□□□□ -2.3
HMGN3Q15651 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.69□□□□□ -2.3
HMGN3Q15651 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.69□□□□□ -2.3
HMGN3Q15651 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.69□□□□□ -2.3
HMGN3Q15651 MTND4LP10-201ENST00000435146 291 ntBASIC0.69□□□□□ -2.3
HMGN3Q15651 TAAR7P-201ENST00000436141 242 ntBASIC0.69□□□□□ -2.3
HMGN3Q15651 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.69□□□□□ -2.3
HMGN3Q15651 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC0.69□□□□□ -2.3
HMGN3Q15651 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.69□□□□□ -2.3
HMGN3Q15651 MRPS17P3-201ENST00000465453 385 ntBASIC0.69□□□□□ -2.3
HMGN3Q15651 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.69□□□□□ -2.3
HMGN3Q15651 AC103851.1-201ENST00000506833 274 ntBASIC0.69□□□□□ -2.3
HMGN3Q15651 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC0.69□□□□□ -2.3
HMGN3Q15651 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.69□□□□□ -2.3
HMGN3Q15651 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.69□□□□□ -2.3
HMGN3Q15651 AC023158.1-201ENST00000561632 1025 ntBASIC0.69□□□□□ -2.3
HMGN3Q15651 AL359821.1-201ENST00000605519 182 ntBASIC0.69□□□□□ -2.3
HMGN3Q15651 AL589743.7-201ENST00000612637 233 ntBASIC0.69□□□□□ -2.3
HMGN3Q15651 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.69□□□□□ -2.3
HMGN3Q15651 AC090772.4-201ENST00000623599 362 ntBASIC0.69□□□□□ -2.3
HMGN3Q15651 AC005832.2-201ENST00000538921 1430 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms