Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 OR2AM1P-201ENST00000422137 422 ntBASIC4.6□□□□□ -1.67
PCDH1Q08174 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDH1Q08174 AC112498.1-201ENST00000444401 332 ntBASIC4.6□□□□□ -1.67
PCDH1Q08174 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PCDH1Q08174 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.6□□□□□ -1.67
PCDH1Q08174 AL513124.1-201ENST00000450410 614 ntBASIC4.6□□□□□ -1.67
PCDH1Q08174 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.6□□□□□ -1.67
PCDH1Q08174 AC013470.1-201ENST00000453438 462 ntBASIC4.6□□□□□ -1.67
PCDH1Q08174 AC108751.2-201ENST00000469993 231 ntBASIC4.6□□□□□ -1.67
PCDH1Q08174 AC087190.1-201ENST00000484462 480 ntBASIC4.6□□□□□ -1.67
PCDH1Q08174 AC107032.1-201ENST00000485945 480 ntBASIC4.6□□□□□ -1.67
PCDH1Q08174 AC010469.2-201ENST00000496412 480 ntBASIC4.6□□□□□ -1.67
PCDH1Q08174 AC108043.1-201ENST00000512696 574 ntBASIC4.6□□□□□ -1.67
PCDH1Q08174 RNU6-1256P-201ENST00000516539 103 ntBASIC4.6□□□□□ -1.67
PCDH1Q08174 Y_RNA.713-201ENST00000517013 96 ntBASIC4.6□□□□□ -1.67
PCDH1Q08174 EDDM3DP-201ENST00000554692 434 ntBASIC4.6□□□□□ -1.67
PCDH1Q08174 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PCDH1Q08174 FTX_2.1-201ENST00000618816 94 ntBASIC4.6□□□□□ -1.67
PCDH1Q08174 MIR6715B-201ENST00000637172 77 ntBASIC4.6□□□□□ -1.67
PCDH1Q08174 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDH1Q08174 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDH1Q08174 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.6□□□□□ -1.67
PCDH1Q08174 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDH1Q08174 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
PCDH1Q08174 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PCDH1Q08174 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PCDH1Q08174 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PCDH1Q08174 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PCDH1Q08174 Y_RNA.29-201ENST00000362570 113 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 snoU2_19.2-201ENST00000363024 80 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 RNA5SP443-201ENST00000363083 132 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 RNU6-280P-201ENST00000364145 104 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 Y_RNA.358-201ENST00000365491 99 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
PCDH1Q08174 Y_RNA.439-201ENST00000384119 94 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 SNORD115-46-201ENST00000390982 71 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 SNORA12.2-201ENST00000391040 156 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 RPL21P75-201ENST00000396599 483 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PCDH1Q08174 MIR921-201ENST00000401133 56 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 RPL21P28-201ENST00000401418 483 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 RN7SKP216-201ENST00000411050 312 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDH1Q08174 AL445487.1-201ENST00000415694 1580 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 AC244098.2-201ENST00000422068 99 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 AL590556.1-201ENST00000423231 483 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 AC091286.1-201ENST00000431233 461 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 AL358472.1-201ENST00000431295 329 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 PSMD10P3-201ENST00000437000 448 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 RPL12P3-201ENST00000440080 396 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PCDH1Q08174 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDH1Q08174 RPL21P11-201ENST00000461458 483 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 RPL21P39-201ENST00000463605 483 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 AC132942.1-201ENST00000486753 483 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 AC093591.1-201ENST00000491435 481 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 RPL21P16-201ENST00000495531 483 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 RNA5SP290-201ENST00000517133 127 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDH1Q08174 DEFB108E-201ENST00000524692 240 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PCDH1Q08174 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDH1Q08174 AC093023.1-201ENST00000547375 507 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDH1Q08174 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDH1Q08174 MIR3921-201ENST00000577308 85 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 RN7SL52P-201ENST00000584271 284 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDH1Q08174 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
PCDH1Q08174 AL139395.1-201ENST00000603662 160 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 AC012603.1-201ENST00000606424 528 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 AL049539.1-201ENST00000611964 459 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 MIR376A1-201ENST00000616574 68 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 AP001148.1-201ENST00000624124 2359 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 U6.92-201ENST00000636464 89 ntBASIC4.59□□□□□ -1.67
PCDH1Q08174 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDH1Q08174 AL592182.3-201ENST00000642132 3304 ntBASIC4.59□□□□□ -1.68
PCDH1Q08174 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
PCDH1Q08174 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.68
PCDH1Q08174 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PCDH1Q08174 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDH1Q08174 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDH1Q08174 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDH1Q08174 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDH1Q08174 RNU6-428P-201ENST00000362942 107 ntBASIC4.58□□□□□ -1.68
PCDH1Q08174 SNORD81.1-201ENST00000363064 77 ntBASIC4.58□□□□□ -1.68
PCDH1Q08174 Y_RNA.180-201ENST00000363867 113 ntBASIC4.58□□□□□ -1.68
PCDH1Q08174 RNY1-201ENST00000364228 113 ntBASIC4.58□□□□□ -1.68
PCDH1Q08174 MIR585-201ENST00000384887 94 ntBASIC4.58□□□□□ -1.68
PCDH1Q08174 MIR34A-201ENST00000385130 110 ntBASIC4.58□□□□□ -1.68
PCDH1Q08174 MIR550A3-201ENST00000390735 95 ntBASIC4.58□□□□□ -1.68
PCDH1Q08174 SNORA40C-201ENST00000391285 128 ntBASIC4.58□□□□□ -1.68
PCDH1Q08174 SNORD58.1-201ENST00000391313 66 ntBASIC4.58□□□□□ -1.68
PCDH1Q08174 AL603910.2-201ENST00000407268 136 ntBASIC4.58□□□□□ -1.68
PCDH1Q08174 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDH1Q08174 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.58□□□□□ -1.68
PCDH1Q08174 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDH1Q08174 RPS29P27-201ENST00000463711 170 ntBASIC4.58□□□□□ -1.68
PCDH1Q08174 RNU4-71P-201ENST00000516258 113 ntBASIC4.58□□□□□ -1.68
PCDH1Q08174 RNU6-789P-201ENST00000517105 102 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms