Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
TPM4P67936 snoU13.8-201ENST00000458890 104 ntBASIC1.81□□□□□ -2.12
TPM4P67936 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.81□□□□□ -2.12
TPM4P67936 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.81□□□□□ -2.12
TPM4P67936 AC008837.1-201ENST00000511513 412 ntBASIC1.81□□□□□ -2.12
TPM4P67936 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.81□□□□□ -2.12
TPM4P67936 AC008549.1-201ENST00000512900 643 ntBASIC1.81□□□□□ -2.12
TPM4P67936 SMURF2P1-201ENST00000514992 481 ntBASIC1.81□□□□□ -2.12
TPM4P67936 RNU1-103P-201ENST00000516502 125 ntBASIC1.81□□□□□ -2.12
TPM4P67936 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.81□□□□□ -2.12
TPM4P67936 MTCO2P15-201ENST00000532655 656 ntBASIC1.81□□□□□ -2.12
TPM4P67936 AC022880.1-201ENST00000534017 973 ntBASIC1.81□□□□□ -2.12
TPM4P67936 ROCK1P1-201ENST00000573767 549 ntBASIC1.81□□□□□ -2.12
TPM4P67936 MIR4435-1-201ENST00000582552 80 ntBASIC1.81□□□□□ -2.12
TPM4P67936 MIR4672-201ENST00000583126 81 ntBASIC1.81□□□□□ -2.12
TPM4P67936 AC090330.1-201ENST00000588646 764 ntBASIC1.81□□□□□ -2.12
TPM4P67936 AC104763.2-201ENST00000604179 382 ntBASIC1.81□□□□□ -2.12
TPM4P67936 uc_338.5-201ENST00000611839 155 ntBASIC1.81□□□□□ -2.12
TPM4P67936 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.81□□□□□ -2.12
TPM4P67936 MIR5739-201ENST00000619803 80 ntBASIC1.81□□□□□ -2.12
TPM4P67936 AC084768.2-201ENST00000622736 221 ntBASIC1.81□□□□□ -2.12
TPM4P67936 ZNF876P-202ENST00000398732 1485 ntBASIC1.81□□□□□ -2.12
TPM4P67936 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.8□□□□□ -2.12
TPM4P67936 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
TPM4P67936 RNU4-42P-201ENST00000364738 142 ntBASIC1.8□□□□□ -2.12
TPM4P67936 Z98749.2-208ENST00000381646 500 ntBASIC1.8□□□□□ -2.12
TPM4P67936 Y_RNA.510-201ENST00000384511 114 ntBASIC1.8□□□□□ -2.12
TPM4P67936 MIR583-201ENST00000384846 75 ntBASIC1.8□□□□□ -2.12
TPM4P67936 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TPM4P67936 BTF3P8-201ENST00000414577 526 ntBASIC1.8□□□□□ -2.12
TPM4P67936 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.8□□□□□ -2.12
TPM4P67936 NANOGP2-201ENST00000435391 727 ntBASIC1.8□□□□□ -2.12
TPM4P67936 MTND1P28-201ENST00000435623 950 ntBASIC1.8□□□□□ -2.12
TPM4P67936 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
TPM4P67936 USP9YP22-201ENST00000438971 294 ntBASIC1.8□□□□□ -2.12
TPM4P67936 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.8□□□□□ -2.12
TPM4P67936 RPL22P13-201ENST00000493291 347 ntBASIC1.8□□□□□ -2.12
TPM4P67936 ANXA2P1-201ENST00000505539 926 ntBASIC1.8□□□□□ -2.12
TPM4P67936 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.8□□□□□ -2.12
TPM4P67936 AC092436.1-201ENST00000506450 503 ntBASIC1.8□□□□□ -2.12
TPM4P67936 AC069306.1-201ENST00000507006 843 ntBASIC1.8□□□□□ -2.12
TPM4P67936 AC096745.1-201ENST00000509945 370 ntBASIC1.8□□□□□ -2.12
TPM4P67936 SNORA26.10-201ENST00000516427 141 ntBASIC1.8□□□□□ -2.12
TPM4P67936 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.8□□□□□ -2.12
TPM4P67936 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.8□□□□□ -2.12
TPM4P67936 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TPM4P67936 CBX3P4-201ENST00000538909 354 ntBASIC1.8□□□□□ -2.12
TPM4P67936 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.8□□□□□ -2.12
TPM4P67936 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TPM4P67936 MTCYBP22-201ENST00000603788 447 ntBASIC1.8□□□□□ -2.12
TPM4P67936 AL139344.1-201ENST00000605228 195 ntBASIC1.8□□□□□ -2.12
TPM4P67936 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.8□□□□□ -2.12
TPM4P67936 AC079416.3-201ENST00000624479 549 ntBASIC1.8□□□□□ -2.12
TPM4P67936 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.8□□□□□ -2.12
TPM4P67936 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.79□□□□□ -2.12
TPM4P67936 Y_RNA.245-201ENST00000364493 95 ntBASIC1.79□□□□□ -2.12
TPM4P67936 SNORA8-201ENST00000384574 139 ntBASIC1.79□□□□□ -2.12
TPM4P67936 RNU6-19P-201ENST00000384718 107 ntBASIC1.79□□□□□ -2.12
TPM4P67936 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.79□□□□□ -2.12
TPM4P67936 AC087884.1-201ENST00000469738 328 ntBASIC1.79□□□□□ -2.12
TPM4P67936 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.79□□□□□ -2.12
TPM4P67936 SNORA4.4-201ENST00000515921 135 ntBASIC1.79□□□□□ -2.12
TPM4P67936 AC022784.5-201ENST00000522241 437 ntBASIC1.79□□□□□ -2.12
TPM4P67936 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.79□□□□□ -2.12
TPM4P67936 MIR502-201ENST00000606349 86 ntBASIC1.79□□□□□ -2.12
TPM4P67936 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.79□□□□□ -2.12
TPM4P67936 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
TPM4P67936 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.79□□□□□ -2.12
TPM4P67936 OR5T3-201ENST00000303059 1023 ntBASIC1.78□□□□□ -2.12
TPM4P67936 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
TPM4P67936 RNU1-72P-201ENST00000362976 153 ntBASIC1.78□□□□□ -2.12
TPM4P67936 RNU6-359P-201ENST00000365466 108 ntBASIC1.78□□□□□ -2.12
TPM4P67936 MIR518A2-201ENST00000384966 87 ntBASIC1.78□□□□□ -2.12
TPM4P67936 UBE2V1P2-201ENST00000397758 440 ntBASIC1.78□□□□□ -2.12
TPM4P67936 RNU6-1140P-201ENST00000410517 106 ntBASIC1.78□□□□□ -2.12
TPM4P67936 CECR9-201ENST00000453421 199 ntBASIC1.78□□□□□ -2.12
TPM4P67936 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.78□□□□□ -2.12
TPM4P67936 CYP2C59P-201ENST00000457790 269 ntBASIC1.78□□□□□ -2.12
TPM4P67936 AC117503.1-201ENST00000472241 394 ntBASIC1.78□□□□□ -2.12
TPM4P67936 AC114981.1-201ENST00000503897 678 ntBASIC1.78□□□□□ -2.12
TPM4P67936 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.78□□□□□ -2.12
TPM4P67936 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.78□□□□□ -2.12
TPM4P67936 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
TPM4P67936 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.78□□□□□ -2.12
TPM4P67936 BNIP3P22-201ENST00000593399 556 ntBASIC1.78□□□□□ -2.12
TPM4P67936 AC009974.1-201ENST00000608881 455 ntBASIC1.78□□□□□ -2.12
TPM4P67936 AC093673.2-201ENST00000609674 331 ntBASIC1.78□□□□□ -2.12
TPM4P67936 AC103710.2-201ENST00000609912 942 ntBASIC1.78□□□□□ -2.12
TPM4P67936 AC011939.3-201ENST00000613686 466 ntBASIC1.78□□□□□ -2.12
TPM4P67936 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
TPM4P67936 HPVC1-201ENST00000629899 1198 ntBASIC1.78□□□□□ -2.12
TPM4P67936 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
TPM4P67936 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.78□□□□□ -2.13
TPM4P67936 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.77□□□□□ -2.13
TPM4P67936 MIR95-201ENST00000385072 81 ntBASIC1.77□□□□□ -2.13
TPM4P67936 SNORA40.18-201ENST00000391200 128 ntBASIC1.77□□□□□ -2.13
TPM4P67936 AC068050.1-201ENST00000394891 380 ntBASIC1.77□□□□□ -2.13
TPM4P67936 TXNP7-201ENST00000406296 293 ntBASIC1.77□□□□□ -2.13
TPM4P67936 AL160275.3-201ENST00000423876 471 ntBASIC1.77□□□□□ -2.13
TPM4P67936 PTGES3P4-201ENST00000426243 356 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms