Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.8□□□□□ -2.12
SKP1P63208 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.8□□□□□ -2.12
SKP1P63208 OR5AL2P-201ENST00000532185 920 ntBASIC1.8□□□□□ -2.12
SKP1P63208 MRPS36P5-201ENST00000551909 298 ntBASIC1.8□□□□□ -2.12
SKP1P63208 OR11H5P-201ENST00000554039 926 ntBASIC1.8□□□□□ -2.12
SKP1P63208 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.8□□□□□ -2.12
SKP1P63208 MIR3167-201ENST00000579623 85 ntBASIC1.8□□□□□ -2.12
SKP1P63208 MTCYBP22-201ENST00000603788 447 ntBASIC1.8□□□□□ -2.12
SKP1P63208 AC116312.1-201ENST00000606841 314 ntBASIC1.8□□□□□ -2.12
SKP1P63208 AC103710.2-201ENST00000609912 942 ntBASIC1.8□□□□□ -2.12
SKP1P63208 U2.15-201ENST00000611544 191 ntBASIC1.8□□□□□ -2.12
SKP1P63208 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
SKP1P63208 U2.16-201ENST00000613119 191 ntBASIC1.8□□□□□ -2.12
SKP1P63208 AC107075.1-201ENST00000613695 314 ntBASIC1.8□□□□□ -2.12
SKP1P63208 U2.12-201ENST00000613778 191 ntBASIC1.8□□□□□ -2.12
SKP1P63208 U2.20-201ENST00000613956 192 ntBASIC1.8□□□□□ -2.12
SKP1P63208 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.8□□□□□ -2.12
SKP1P63208 U2.9-201ENST00000615427 191 ntBASIC1.8□□□□□ -2.12
SKP1P63208 U2.11-201ENST00000616345 191 ntBASIC1.8□□□□□ -2.12
SKP1P63208 U2.2-201ENST00000616535 191 ntBASIC1.8□□□□□ -2.12
SKP1P63208 U2.3-201ENST00000617785 191 ntBASIC1.8□□□□□ -2.12
SKP1P63208 U2.19-201ENST00000618602 191 ntBASIC1.8□□□□□ -2.12
SKP1P63208 RNU2-1-201ENST00000618664 191 ntBASIC1.8□□□□□ -2.12
SKP1P63208 U2.6-201ENST00000619225 191 ntBASIC1.8□□□□□ -2.12
SKP1P63208 U2.5-201ENST00000619465 191 ntBASIC1.8□□□□□ -2.12
SKP1P63208 MIR5739-201ENST00000619803 80 ntBASIC1.8□□□□□ -2.12
SKP1P63208 U2.10-201ENST00000620268 191 ntBASIC1.8□□□□□ -2.12
SKP1P63208 AL445264.1-201ENST00000621719 171 ntBASIC1.8□□□□□ -2.12
SKP1P63208 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SKP1P63208 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.8□□□□□ -2.12
SKP1P63208 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.8□□□□□ -2.12
SKP1P63208 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
SKP1P63208 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.79□□□□□ -2.12
SKP1P63208 RNU6-748P-201ENST00000384648 107 ntBASIC1.79□□□□□ -2.12
SKP1P63208 SNORD65.1-201ENST00000390889 71 ntBASIC1.79□□□□□ -2.12
SKP1P63208 AL356432.1-201ENST00000405809 419 ntBASIC1.79□□□□□ -2.12
SKP1P63208 RN7SKP284-201ENST00000411002 343 ntBASIC1.79□□□□□ -2.12
SKP1P63208 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.79□□□□□ -2.12
SKP1P63208 RPL31P63-201ENST00000422565 375 ntBASIC1.79□□□□□ -2.12
SKP1P63208 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.79□□□□□ -2.12
SKP1P63208 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.79□□□□□ -2.12
SKP1P63208 AL353729.1-201ENST00000425044 720 ntBASIC1.79□□□□□ -2.12
SKP1P63208 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.79□□□□□ -2.12
SKP1P63208 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.79□□□□□ -2.12
SKP1P63208 MTND4P6-201ENST00000438297 472 ntBASIC1.79□□□□□ -2.12
SKP1P63208 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.79□□□□□ -2.12
SKP1P63208 CYP2C59P-201ENST00000457790 269 ntBASIC1.79□□□□□ -2.12
SKP1P63208 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.79□□□□□ -2.12
SKP1P63208 AC018437.1-201ENST00000492214 406 ntBASIC1.79□□□□□ -2.12
SKP1P63208 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SKP1P63208 RNU6-927P-201ENST00000516199 100 ntBASIC1.79□□□□□ -2.12
SKP1P63208 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.79□□□□□ -2.12
SKP1P63208 AP005639.2-201ENST00000527592 928 ntBASIC1.79□□□□□ -2.12
SKP1P63208 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.79□□□□□ -2.12
SKP1P63208 AC079148.1-201ENST00000565944 819 ntBASIC1.79□□□□□ -2.12
SKP1P63208 AC243960.4-201ENST00000600532 288 ntBASIC1.79□□□□□ -2.12
SKP1P63208 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.79□□□□□ -2.12
SKP1P63208 AL355297.2-201ENST00000604792 129 ntBASIC1.79□□□□□ -2.12
SKP1P63208 AC026741.1-201ENST00000605892 482 ntBASIC1.79□□□□□ -2.12
SKP1P63208 AC106052.1-201ENST00000608029 497 ntBASIC1.79□□□□□ -2.12
SKP1P63208 AC109454.4-201ENST00000623411 649 ntBASIC1.79□□□□□ -2.12
SKP1P63208 AC019226.1-201ENST00000625666 515 ntBASIC1.79□□□□□ -2.12
SKP1P63208 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SKP1P63208 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.79□□□□□ -2.12
SKP1P63208 CDR1-202ENST00000625883 1485 ntBASIC1.78□□□□□ -2.12
SKP1P63208 RNA5SP276-201ENST00000362580 94 ntBASIC1.78□□□□□ -2.12
SKP1P63208 RNU6-223P-201ENST00000362830 107 ntBASIC1.78□□□□□ -2.12
SKP1P63208 RNU6-707P-201ENST00000364647 95 ntBASIC1.78□□□□□ -2.12
SKP1P63208 RNU6-19P-201ENST00000384718 107 ntBASIC1.78□□□□□ -2.12
SKP1P63208 SNORA40.19-201ENST00000390846 128 ntBASIC1.78□□□□□ -2.12
SKP1P63208 MIR1261-201ENST00000408659 82 ntBASIC1.78□□□□□ -2.12
SKP1P63208 RNA5SP450-201ENST00000411206 102 ntBASIC1.78□□□□□ -2.12
SKP1P63208 RPL17P12-201ENST00000413391 526 ntBASIC1.78□□□□□ -2.12
SKP1P63208 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.78□□□□□ -2.12
SKP1P63208 PTGES3P4-201ENST00000426243 356 ntBASIC1.78□□□□□ -2.12
SKP1P63208 RPL23AP6-201ENST00000446637 472 ntBASIC1.78□□□□□ -2.12
SKP1P63208 AL353718.1-201ENST00000451028 517 ntBASIC1.78□□□□□ -2.12
SKP1P63208 MTCO2P9-201ENST00000503214 694 ntBASIC1.78□□□□□ -2.12
SKP1P63208 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SKP1P63208 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.78□□□□□ -2.12
SKP1P63208 MTCO2P15-201ENST00000532655 656 ntBASIC1.78□□□□□ -2.12
SKP1P63208 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.78□□□□□ -2.12
SKP1P63208 HIGD1AP17-201ENST00000554576 276 ntBASIC1.78□□□□□ -2.12
SKP1P63208 AC122134.1-202ENST00000569111 1201 ntBASIC1.78□□□□□ -2.12
SKP1P63208 ROCK1P1-201ENST00000573767 549 ntBASIC1.78□□□□□ -2.12
SKP1P63208 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.78□□□□□ -2.12
SKP1P63208 MIR3935-201ENST00000583472 104 ntBASIC1.78□□□□□ -2.12
SKP1P63208 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.78□□□□□ -2.12
SKP1P63208 AL158827.2-201ENST00000602494 330 ntBASIC1.78□□□□□ -2.12
SKP1P63208 AC069304.2-201ENST00000605154 435 ntBASIC1.78□□□□□ -2.12
SKP1P63208 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.78□□□□□ -2.12
SKP1P63208 YWHAEP7-203ENST00000622054 312 ntBASIC1.78□□□□□ -2.12
SKP1P63208 AL691447.3-201ENST00000635020 330 ntBASIC1.78□□□□□ -2.12
SKP1P63208 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.78□□□□□ -2.13
SKP1P63208 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
SKP1P63208 RNU6-609P-201ENST00000365459 107 ntBASIC1.77□□□□□ -2.13
SKP1P63208 RNU6-516P-201ENST00000411381 104 ntBASIC1.77□□□□□ -2.13
SKP1P63208 MTCO1P3-201ENST00000429327 192 ntBASIC1.77□□□□□ -2.13
SKP1P63208 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.77□□□□□ -2.13
SKP1P63208 AL451074.3-201ENST00000437709 472 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms