Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.32□□□□□ -2.04
CDH4P55283 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.32□□□□□ -2.04
CDH4P55283 AC068790.3-201ENST00000602988 553 ntBASIC2.32□□□□□ -2.04
CDH4P55283 AC097468.3-201ENST00000607956 456 ntBASIC2.32□□□□□ -2.04
CDH4P55283 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.32□□□□□ -2.04
CDH4P55283 AC079416.3-201ENST00000624479 549 ntBASIC2.32□□□□□ -2.04
CDH4P55283 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDH4P55283 ZNF658B-202ENST00000615961 3375 ntBASIC2.32□□□□□ -2.04
CDH4P55283 MTND5P6-201ENST00000422338 1798 ntBASIC2.31□□□□□ -2.04
CDH4P55283 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDH4P55283 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.31□□□□□ -2.04
CDH4P55283 RNU6-512P-201ENST00000364438 103 ntBASIC2.31□□□□□ -2.04
CDH4P55283 MIR221-201ENST00000385135 110 ntBASIC2.31□□□□□ -2.04
CDH4P55283 AL359634.1-202ENST00000404721 284 ntBASIC2.31□□□□□ -2.04
CDH4P55283 RNA5SP425-201ENST00000410336 112 ntBASIC2.31□□□□□ -2.04
CDH4P55283 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.31□□□□□ -2.04
CDH4P55283 AC013410.2-201ENST00000422627 201 ntBASIC2.31□□□□□ -2.04
CDH4P55283 AL445669.1-201ENST00000426743 755 ntBASIC2.31□□□□□ -2.04
CDH4P55283 AC005094.1-201ENST00000440420 368 ntBASIC2.31□□□□□ -2.04
CDH4P55283 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.31□□□□□ -2.04
CDH4P55283 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.31□□□□□ -2.04
CDH4P55283 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CDH4P55283 RPL23AP35-201ENST00000451906 501 ntBASIC2.31□□□□□ -2.04
CDH4P55283 AC106872.3-201ENST00000495104 446 ntBASIC2.31□□□□□ -2.04
CDH4P55283 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
CDH4P55283 RNU6-64P-201ENST00000517119 105 ntBASIC2.31□□□□□ -2.04
CDH4P55283 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CDH4P55283 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH4P55283 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH4P55283 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.31□□□□□ -2.04
CDH4P55283 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.31□□□□□ -2.04
CDH4P55283 ISCA1P3-201ENST00000577104 373 ntBASIC2.31□□□□□ -2.04
CDH4P55283 AC024933.1-201ENST00000608472 348 ntBASIC2.31□□□□□ -2.04
CDH4P55283 AC009974.1-201ENST00000608881 455 ntBASIC2.31□□□□□ -2.04
CDH4P55283 AC072039.2-201ENST00000608883 439 ntBASIC2.31□□□□□ -2.04
CDH4P55283 AC097478.2-201ENST00000610572 514 ntBASIC2.31□□□□□ -2.04
CDH4P55283 AC012150.2-201ENST00000621300 544 ntBASIC2.31□□□□□ -2.04
CDH4P55283 AL136313.1-201ENST00000624804 202 ntBASIC2.31□□□□□ -2.04
CDH4P55283 OR4G3P-201ENST00000633500 913 ntBASIC2.31□□□□□ -2.04
CDH4P55283 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDH4P55283 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDH4P55283 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CDH4P55283 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.31□□□□□ -2.04
CDH4P55283 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CDH4P55283 RNU6-723P-201ENST00000383973 107 ntBASIC2.3□□□□□ -2.04
CDH4P55283 RNU6-906P-201ENST00000384700 70 ntBASIC2.3□□□□□ -2.04
CDH4P55283 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CDH4P55283 AL139397.2-201ENST00000404529 772 ntBASIC2.3□□□□□ -2.04
CDH4P55283 ELOCP9-201ENST00000418624 239 ntBASIC2.3□□□□□ -2.04
CDH4P55283 AL353729.1-201ENST00000425044 720 ntBASIC2.3□□□□□ -2.04
CDH4P55283 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH4P55283 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH4P55283 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH4P55283 RPL32P28-201ENST00000443577 397 ntBASIC2.3□□□□□ -2.04
CDH4P55283 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH4P55283 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH4P55283 USP9YP25-201ENST00000457708 443 ntBASIC2.3□□□□□ -2.04
CDH4P55283 AC104090.1-201ENST00000506341 1171 ntBASIC2.3□□□□□ -2.04
CDH4P55283 SCARNA1-201ENST00000517138 166 ntBASIC2.3□□□□□ -2.04
CDH4P55283 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
CDH4P55283 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.3□□□□□ -2.04
CDH4P55283 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.3□□□□□ -2.04
CDH4P55283 AC026464.5-201ENST00000562497 722 ntBASIC2.3□□□□□ -2.04
CDH4P55283 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.3□□□□□ -2.04
CDH4P55283 MTND1P8-201ENST00000571424 950 ntBASIC2.3□□□□□ -2.04
CDH4P55283 MIR3167-201ENST00000579623 85 ntBASIC2.3□□□□□ -2.04
CDH4P55283 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH4P55283 AC005261.5-201ENST00000596280 355 ntBASIC2.3□□□□□ -2.04
CDH4P55283 AC245884.10-201ENST00000597355 337 ntBASIC2.3□□□□□ -2.04
CDH4P55283 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.3□□□□□ -2.04
CDH4P55283 BNIP3P23-201ENST00000599655 511 ntBASIC2.3□□□□□ -2.04
CDH4P55283 AL391813.1-201ENST00000603098 260 ntBASIC2.3□□□□□ -2.04
CDH4P55283 AC011458.1-201ENST00000604034 617 ntBASIC2.3□□□□□ -2.04
CDH4P55283 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.3□□□□□ -2.04
CDH4P55283 AC025588.2-201ENST00000604851 466 ntBASIC2.3□□□□□ -2.04
CDH4P55283 AL592221.1-201ENST00000605266 382 ntBASIC2.3□□□□□ -2.04
CDH4P55283 AL021997.1-201ENST00000605757 193 ntBASIC2.3□□□□□ -2.04
CDH4P55283 DUSP12P1-201ENST00000612874 516 ntBASIC2.3□□□□□ -2.04
CDH4P55283 AP000484.1-201ENST00000620067 1252 ntBASIC2.3□□□□□ -2.04
CDH4P55283 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDH4P55283 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CDH4P55283 AC106754.1-201ENST00000562632 1513 ntBASIC2.3□□□□□ -2.04
CDH4P55283 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.3□□□□□ -2.04
CDH4P55283 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CDH4P55283 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDH4P55283 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CDH4P55283 UBE2L2-201ENST00000254302 429 ntBASIC2.29□□□□□ -2.04
CDH4P55283 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.29□□□□□ -2.04
CDH4P55283 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CDH4P55283 OR5H15-201ENST00000383696 930 ntBASIC2.29□□□□□ -2.04
CDH4P55283 RNU6-658P-201ENST00000384606 106 ntBASIC2.29□□□□□ -2.04
CDH4P55283 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CDH4P55283 RNU6-278P-201ENST00000390945 109 ntBASIC2.29□□□□□ -2.04
CDH4P55283 MIR1305-201ENST00000408300 86 ntBASIC2.29□□□□□ -2.04
CDH4P55283 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.29□□□□□ -2.04
CDH4P55283 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.29□□□□□ -2.04
CDH4P55283 AC104651.1-201ENST00000427559 735 ntBASIC2.29□□□□□ -2.04
CDH4P55283 HMGB1P27-201ENST00000431429 603 ntBASIC2.29□□□□□ -2.04
CDH4P55283 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.29□□□□□ -2.04
CDH4P55283 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms