Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 AL627311.1-201ENST00000431514 115 ntBASIC6.22□□□□□ -1.41
PRIM1P49642 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC6.22□□□□□ -1.41
PRIM1P49642 AC005002.2-201ENST00000438228 269 ntBASIC6.22□□□□□ -1.41
PRIM1P49642 RPL7AP61-201ENST00000443410 636 ntBASIC6.22□□□□□ -1.41
PRIM1P49642 HIGD1AP2-201ENST00000446367 280 ntBASIC6.22□□□□□ -1.41
PRIM1P49642 snoU13.30-201ENST00000458951 104 ntBASIC6.22□□□□□ -1.41
PRIM1P49642 AC012158.1-204ENST00000483430 465 ntBASIC6.22□□□□□ -1.41
PRIM1P49642 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC6.22□□□□□ -1.41
PRIM1P49642 H3F3AP1-201ENST00000559984 334 ntBASIC6.22□□□□□ -1.41
PRIM1P49642 AC011921.3-201ENST00000605540 361 ntBASIC6.22□□□□□ -1.41
PRIM1P49642 AC005046.1-201ENST00000608515 625 ntBASIC6.22□□□□□ -1.41
PRIM1P49642 AC104465.1-201ENST00000611365 139 ntBASIC6.22□□□□□ -1.41
PRIM1P49642 AC073349.3-201ENST00000617616 186 ntBASIC6.22□□□□□ -1.41
PRIM1P49642 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PRIM1P49642 AC090740.1-201ENST00000623193 2262 ntBASIC6.22□□□□□ -1.41
PRIM1P49642 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.22□□□□□ -1.41
PRIM1P49642 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.21□□□□□ -1.41
PRIM1P49642 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC6.21□□□□□ -1.41
PRIM1P49642 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC6.21□□□□□ -1.41
PRIM1P49642 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PRIM1P49642 RNU6-384P-201ENST00000364900 104 ntBASIC6.21□□□□□ -1.42
PRIM1P49642 SNORA36C-201ENST00000384289 132 ntBASIC6.21□□□□□ -1.42
PRIM1P49642 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PRIM1P49642 RNU1-82P-201ENST00000390851 165 ntBASIC6.21□□□□□ -1.42
PRIM1P49642 U3.39-201ENST00000408569 239 ntBASIC6.21□□□□□ -1.42
PRIM1P49642 RNU6ATAC34P-201ENST00000408879 121 ntBASIC6.21□□□□□ -1.42
PRIM1P49642 RNU4-78P-201ENST00000410940 126 ntBASIC6.21□□□□□ -1.42
PRIM1P49642 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC6.21□□□□□ -1.42
PRIM1P49642 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC6.21□□□□□ -1.42
PRIM1P49642 AP000907.1-201ENST00000428428 510 ntBASIC6.21□□□□□ -1.42
PRIM1P49642 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC6.21□□□□□ -1.42
PRIM1P49642 RPL12P18-201ENST00000437175 325 ntBASIC6.21□□□□□ -1.42
PRIM1P49642 RPS29P27-201ENST00000463711 170 ntBASIC6.21□□□□□ -1.42
PRIM1P49642 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC6.21□□□□□ -1.42
PRIM1P49642 AC084851.1-201ENST00000529105 249 ntBASIC6.21□□□□□ -1.42
PRIM1P49642 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PRIM1P49642 AC005476.1-201ENST00000554427 397 ntBASIC6.21□□□□□ -1.42
PRIM1P49642 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.21□□□□□ -1.42
PRIM1P49642 AC008785.1-201ENST00000624475 456 ntBASIC6.21□□□□□ -1.42
PRIM1P49642 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
PRIM1P49642 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.21□□□□□ -1.42
PRIM1P49642 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PRIM1P49642 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
PRIM1P49642 TLK1P1-201ENST00000456760 2440 ntBASIC6.2□□□□□ -1.42
PRIM1P49642 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
PRIM1P49642 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
PRIM1P49642 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PRIM1P49642 RNU6-1167P-201ENST00000363227 94 ntBASIC6.2□□□□□ -1.42
PRIM1P49642 Y_RNA.418-201ENST00000384029 102 ntBASIC6.2□□□□□ -1.42
PRIM1P49642 BTF3L4P2-201ENST00000392798 346 ntBASIC6.2□□□□□ -1.42
PRIM1P49642 LAP3P1-201ENST00000403648 294 ntBASIC6.2□□□□□ -1.42
PRIM1P49642 RNU6-1135P-201ENST00000411083 103 ntBASIC6.2□□□□□ -1.42
PRIM1P49642 Z82188.1-201ENST00000436709 154 ntBASIC6.2□□□□□ -1.42
PRIM1P49642 RNU1-6P-201ENST00000516290 144 ntBASIC6.2□□□□□ -1.42
PRIM1P49642 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC6.2□□□□□ -1.42
PRIM1P49642 AC105129.1-201ENST00000560250 297 ntBASIC6.2□□□□□ -1.42
PRIM1P49642 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC6.2□□□□□ -1.42
PRIM1P49642 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PRIM1P49642 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PRIM1P49642 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PRIM1P49642 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PRIM1P49642 NCAPGP1-201ENST00000505112 1814 ntBASIC6.2□□□□□ -1.42
PRIM1P49642 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
PRIM1P49642 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC6.2□□□□□ -1.42
PRIM1P49642 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC6.2□□□□□ -1.42
PRIM1P49642 AL672167.1-204ENST00000641875 3017 ntBASIC6.2□□□□□ -1.42
PRIM1P49642 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PRIM1P49642 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PRIM1P49642 AC005332.5-201ENST00000591222 2919 ntBASIC6.19□□□□□ -1.42
PRIM1P49642 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PRIM1P49642 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PRIM1P49642 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.19□□□□□ -1.42
PRIM1P49642 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PRIM1P49642 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PRIM1P49642 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PRIM1P49642 SNORA73.1-201ENST00000363107 205 ntBASIC6.19□□□□□ -1.42
PRIM1P49642 Y_RNA.123-201ENST00000363338 102 ntBASIC6.19□□□□□ -1.42
PRIM1P49642 RNA5SP28-201ENST00000363841 119 ntBASIC6.19□□□□□ -1.42
PRIM1P49642 SNORD14B-201ENST00000364533 90 ntBASIC6.19□□□□□ -1.42
PRIM1P49642 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PRIM1P49642 MIR134-201ENST00000385258 73 ntBASIC6.19□□□□□ -1.42
PRIM1P49642 RNU6-1168P-201ENST00000390831 104 ntBASIC6.19□□□□□ -1.42
PRIM1P49642 SNORA40.19-201ENST00000390846 128 ntBASIC6.19□□□□□ -1.42
PRIM1P49642 AL592148.1-201ENST00000413568 445 ntBASIC6.19□□□□□ -1.42
PRIM1P49642 RPS26P47-201ENST00000427219 348 ntBASIC6.19□□□□□ -1.42
PRIM1P49642 RPL23AP24-201ENST00000458203 385 ntBASIC6.19□□□□□ -1.42
PRIM1P49642 AL160314.1-201ENST00000490836 438 ntBASIC6.19□□□□□ -1.42
PRIM1P49642 RNU6-513P-201ENST00000516104 104 ntBASIC6.19□□□□□ -1.42
PRIM1P49642 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
PRIM1P49642 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PRIM1P49642 AC002545.1-201ENST00000592511 181 ntBASIC6.19□□□□□ -1.42
PRIM1P49642 VN1R85P-201ENST00000601587 426 ntBASIC6.19□□□□□ -1.42
PRIM1P49642 B3GNTL1P2-201ENST00000603673 288 ntBASIC6.19□□□□□ -1.42
PRIM1P49642 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC6.19□□□□□ -1.42
PRIM1P49642 AC091895.1-201ENST00000624494 256 ntBASIC6.19□□□□□ -1.42
PRIM1P49642 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
PRIM1P49642 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
PRIM1P49642 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC6.19□□□□□ -1.42
PRIM1P49642 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PRIM1P49642 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms