Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AC021205.2-201ENST00000480069 347 ntBASIC2.93□□□□□ -1.94
HOXA1P49639 RPL21P99-201ENST00000480369 423 ntBASIC2.93□□□□□ -1.94
HOXA1P49639 RN7SL323P-201ENST00000494712 295 ntBASIC2.93□□□□□ -1.94
HOXA1P49639 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HOXA1P49639 AL359273.1-201ENST00000510918 627 ntBASIC2.93□□□□□ -1.94
HOXA1P49639 RNU6-685P-201ENST00000517088 95 ntBASIC2.93□□□□□ -1.94
HOXA1P49639 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXA1P49639 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.93□□□□□ -1.94
HOXA1P49639 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HOXA1P49639 RANP3-201ENST00000530970 276 ntBASIC2.93□□□□□ -1.94
HOXA1P49639 AC023050.3-201ENST00000541142 333 ntBASIC2.93□□□□□ -1.94
HOXA1P49639 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXA1P49639 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC2.93□□□□□ -1.94
HOXA1P49639 AC025884.1-201ENST00000556034 378 ntBASIC2.93□□□□□ -1.94
HOXA1P49639 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.93□□□□□ -1.94
HOXA1P49639 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.93□□□□□ -1.94
HOXA1P49639 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.93□□□□□ -1.94
HOXA1P49639 BNIP3P10-201ENST00000605360 577 ntBASIC2.93□□□□□ -1.94
HOXA1P49639 AC009994.1-201ENST00000606889 253 ntBASIC2.93□□□□□ -1.94
HOXA1P49639 AP002826.1-201ENST00000608835 315 ntBASIC2.93□□□□□ -1.94
HOXA1P49639 AL390240.1-201ENST00000612950 384 ntBASIC2.93□□□□□ -1.94
HOXA1P49639 AC005344.1-201ENST00000613391 459 ntBASIC2.93□□□□□ -1.94
HOXA1P49639 Y_RNA.804-201ENST00000615262 101 ntBASIC2.93□□□□□ -1.94
HOXA1P49639 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.93□□□□□ -1.94
HOXA1P49639 U6.42-201ENST00000618440 107 ntBASIC2.93□□□□□ -1.94
HOXA1P49639 MIR4275-201ENST00000636486 87 ntBASIC2.93□□□□□ -1.94
HOXA1P49639 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.93□□□□□ -1.94
HOXA1P49639 AL356274.2-201ENST00000624379 3752 ntBASIC2.93□□□□□ -1.94
HOXA1P49639 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.93□□□□□ -1.94
HOXA1P49639 CD36-221ENST00000534394 1741 ntTSL 2 BASIC2.93□□□□□ -1.94
HOXA1P49639 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
HOXA1P49639 AP004289.2-201ENST00000444413 1457 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
HOXA1P49639 UBE2L2-201ENST00000254302 429 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 Y_RNA.378-201ENST00000365652 113 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 DEFB109C-201ENST00000382575 264 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 DEFB109B-201ENST00000382656 264 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 MIR325-201ENST00000385260 98 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HOXA1P49639 AL162578.1-201ENST00000406202 378 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 U3.42-201ENST00000408746 214 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 RNU2-29P-201ENST00000410423 189 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 Z85995.1-201ENST00000415547 335 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 RPL21P111-201ENST00000418453 477 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXA1P49639 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.92□□□□□ -1.94
HOXA1P49639 AL592045.1-201ENST00000429867 352 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.92□□□□□ -1.94
HOXA1P49639 HMGB3P11-201ENST00000440127 604 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 MTCO3P18-201ENST00000440206 761 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 USP9YP8-201ENST00000441913 500 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.92□□□□□ -1.94
HOXA1P49639 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.92□□□□□ -1.94
HOXA1P49639 SNRPFP3-201ENST00000457792 225 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.92□□□□□ -1.94
HOXA1P49639 AC091951.2-201ENST00000500762 203 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 AC009901.1-201ENST00000506703 541 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXA1P49639 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXA1P49639 SCARNA15.2-201ENST00000516409 127 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 SNORD60.2-201ENST00000516883 86 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 RNU6-677P-201ENST00000516914 101 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXA1P49639 BTF3P12-201ENST00000519620 469 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC2.92□□□□□ -1.94
HOXA1P49639 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC2.92□□□□□ -1.94
HOXA1P49639 ADI1P3-201ENST00000549509 470 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXA1P49639 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXA1P49639 MIR4424-201ENST00000585257 86 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.92□□□□□ -1.94
HOXA1P49639 RNU6-89P-201ENST00000606519 100 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 MIR15A-201ENST00000607334 83 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 uc_338.34-201ENST00000617467 174 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.92□□□□□ -1.94
HOXA1P49639 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HOXA1P49639 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
HOXA1P49639 TPTE2P4-201ENST00000258589 1605 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 AC103710.2-202ENST00000641454 2853 ntBASIC2.92□□□□□ -1.94
HOXA1P49639 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HOXA1P49639 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HOXA1P49639 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.92□□□□□ -1.94
HOXA1P49639 AC093831.2-201ENST00000624393 3427 ntBASIC2.91□□□□□ -1.94
HOXA1P49639 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HOXA1P49639 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.91□□□□□ -1.94
HOXA1P49639 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.91□□□□□ -1.94
HOXA1P49639 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HOXA1P49639 SPRR2C-201ENST00000290702 219 ntBASIC2.91□□□□□ -1.94
HOXA1P49639 RPL32P3-201ENST00000359025 275 ntBASIC2.91□□□□□ -1.94
HOXA1P49639 Y_RNA.231-201ENST00000364358 102 ntBASIC2.91□□□□□ -1.94
HOXA1P49639 SNORA32.2-201ENST00000384049 122 ntBASIC2.91□□□□□ -1.94
HOXA1P49639 MIR514A2-201ENST00000385131 88 ntBASIC2.91□□□□□ -1.94
HOXA1P49639 MIR514A3-201ENST00000385132 88 ntBASIC2.91□□□□□ -1.94
HOXA1P49639 SNORA3.3-201ENST00000408712 125 ntBASIC2.91□□□□□ -1.94
HOXA1P49639 RNU6-628P-201ENST00000410675 107 ntBASIC2.91□□□□□ -1.94
HOXA1P49639 RNU6-193P-201ENST00000410977 107 ntBASIC2.91□□□□□ -1.94
HOXA1P49639 RNU2-71P-201ENST00000411395 189 ntBASIC2.91□□□□□ -1.94
HOXA1P49639 BX842559.1-201ENST00000419615 532 ntBASIC2.91□□□□□ -1.94
HOXA1P49639 UBE2D3P2-201ENST00000424409 445 ntBASIC2.91□□□□□ -1.94
HOXA1P49639 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms