Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.16□□□□□ -1.9
RPL3P39023 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.16□□□□□ -1.9
RPL3P39023 AC125238.1-201ENST00000448842 249 ntBASIC3.16□□□□□ -1.9
RPL3P39023 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.16□□□□□ -1.9
RPL3P39023 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.16□□□□□ -1.9
RPL3P39023 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.16□□□□□ -1.9
RPL3P39023 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.16□□□□□ -1.9
RPL3P39023 RPL9P32-201ENST00000464118 620 ntBASIC3.16□□□□□ -1.9
RPL3P39023 RPL31P60-201ENST00000478450 367 ntBASIC3.16□□□□□ -1.9
RPL3P39023 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.16□□□□□ -1.9
RPL3P39023 AC091951.2-201ENST00000500762 203 ntBASIC3.16□□□□□ -1.9
RPL3P39023 AC008628.2-201ENST00000502605 298 ntBASIC3.16□□□□□ -1.9
RPL3P39023 AC114781.4-201ENST00000513707 639 ntBASIC3.16□□□□□ -1.9
RPL3P39023 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.16□□□□□ -1.9
RPL3P39023 AC104027.1-201ENST00000521887 300 ntBASIC3.16□□□□□ -1.9
RPL3P39023 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.16□□□□□ -1.9
RPL3P39023 AC078814.3-201ENST00000553036 491 ntBASIC3.16□□□□□ -1.9
RPL3P39023 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.16□□□□□ -1.9
RPL3P39023 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.16□□□□□ -1.9
RPL3P39023 AC018638.8-201ENST00000588755 281 ntBASIC3.16□□□□□ -1.9
RPL3P39023 AC174048.1-201ENST00000603389 144 ntBASIC3.16□□□□□ -1.9
RPL3P39023 AL158032.1-201ENST00000605401 106 ntBASIC3.16□□□□□ -1.9
RPL3P39023 AC022893.3-201ENST00000607665 437 ntBASIC3.16□□□□□ -1.9
RPL3P39023 uc_338.11-201ENST00000619132 160 ntBASIC3.16□□□□□ -1.9
RPL3P39023 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.16□□□□□ -1.9
RPL3P39023 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.16□□□□□ -1.9
RPL3P39023 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RPL3P39023 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.16□□□□□ -1.9
RPL3P39023 HSPA8P4-201ENST00000511877 1920 ntBASIC3.15□□□□□ -1.9
RPL3P39023 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RPL3P39023 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.15□□□□□ -1.9
RPL3P39023 RNU4-35P-201ENST00000362588 141 ntBASIC3.15□□□□□ -1.91
RPL3P39023 RNA5SP197-201ENST00000363357 119 ntBASIC3.15□□□□□ -1.91
RPL3P39023 Y_RNA.157-201ENST00000363638 102 ntBASIC3.15□□□□□ -1.91
RPL3P39023 RNU6-522P-201ENST00000364497 107 ntBASIC3.15□□□□□ -1.91
RPL3P39023 RNU4-66P-201ENST00000365199 138 ntBASIC3.15□□□□□ -1.91
RPL3P39023 RNU1-64P-201ENST00000365443 163 ntBASIC3.15□□□□□ -1.91
RPL3P39023 SNORD6-201ENST00000365444 73 ntBASIC3.15□□□□□ -1.91
RPL3P39023 RNU6-116P-201ENST00000384042 109 ntBASIC3.15□□□□□ -1.91
RPL3P39023 CISD1P1-201ENST00000393907 327 ntBASIC3.15□□□□□ -1.91
RPL3P39023 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.15□□□□□ -1.91
RPL3P39023 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.15□□□□□ -1.91
RPL3P39023 RNU2-37P-201ENST00000410695 177 ntBASIC3.15□□□□□ -1.91
RPL3P39023 Y_RNA.615-201ENST00000410769 117 ntBASIC3.15□□□□□ -1.91
RPL3P39023 RNU6-373P-201ENST00000411247 98 ntBASIC3.15□□□□□ -1.91
RPL3P39023 BX842559.1-201ENST00000419615 532 ntBASIC3.15□□□□□ -1.91
RPL3P39023 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.15□□□□□ -1.91
RPL3P39023 NDUFB4P7-201ENST00000423198 363 ntBASIC3.15□□□□□ -1.91
RPL3P39023 CALM2P2-201ENST00000428512 440 ntBASIC3.15□□□□□ -1.91
RPL3P39023 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.15□□□□□ -1.91
RPL3P39023 AC098614.3-201ENST00000438957 440 ntBASIC3.15□□□□□ -1.91
RPL3P39023 SNRPEP8-201ENST00000442866 260 ntBASIC3.15□□□□□ -1.91
RPL3P39023 AL133547.1-201ENST00000448546 220 ntBASIC3.15□□□□□ -1.91
RPL3P39023 PMCHL2-203ENST00000457791 237 ntBASIC3.15□□□□□ -1.91
RPL3P39023 SNRPFP3-201ENST00000457792 225 ntBASIC3.15□□□□□ -1.91
RPL3P39023 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.15□□□□□ -1.91
RPL3P39023 RPL21P8-201ENST00000465083 535 ntBASIC3.15□□□□□ -1.91
RPL3P39023 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RPL3P39023 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.15□□□□□ -1.91
RPL3P39023 AC114786.4-201ENST00000508771 728 ntBASIC3.15□□□□□ -1.91
RPL3P39023 AL359273.1-201ENST00000510918 627 ntBASIC3.15□□□□□ -1.91
RPL3P39023 TTC39CP1-201ENST00000512513 755 ntBASIC3.15□□□□□ -1.91
RPL3P39023 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.15□□□□□ -1.91
RPL3P39023 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.15□□□□□ -1.91
RPL3P39023 RNA5SP217-201ENST00000515959 91 ntBASIC3.15□□□□□ -1.91
RPL3P39023 RNU6-1038P-201ENST00000516516 104 ntBASIC3.15□□□□□ -1.91
RPL3P39023 RNU6-677P-201ENST00000516914 101 ntBASIC3.15□□□□□ -1.91
RPL3P39023 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.15□□□□□ -1.91
RPL3P39023 RANP3-201ENST00000530970 276 ntBASIC3.15□□□□□ -1.91
RPL3P39023 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.15□□□□□ -1.91
RPL3P39023 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.15□□□□□ -1.91
RPL3P39023 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.15□□□□□ -1.91
RPL3P39023 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.15□□□□□ -1.91
RPL3P39023 AC013553.2-201ENST00000604244 589 ntBASIC3.15□□□□□ -1.91
RPL3P39023 AL390240.1-201ENST00000612950 384 ntBASIC3.15□□□□□ -1.91
RPL3P39023 AL157817.1-201ENST00000614264 790 ntBASIC3.15□□□□□ -1.91
RPL3P39023 AC034102.8-201ENST00000615146 484 ntBASIC3.15□□□□□ -1.91
RPL3P39023 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.15□□□□□ -1.91
RPL3P39023 AL136221.1-201ENST00000621449 509 ntBASIC3.15□□□□□ -1.91
RPL3P39023 AL034408.1-202ENST00000636088 415 ntBASIC3.15□□□□□ -1.91
RPL3P39023 AC100810.6-201ENST00000638068 285 ntBASIC3.15□□□□□ -1.91
RPL3P39023 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.15□□□□□ -1.91
RPL3P39023 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
RPL3P39023 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.15□□□□□ -1.91
RPL3P39023 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RPL3P39023 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RPL3P39023 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.15□□□□□ -1.91
RPL3P39023 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPL3P39023 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
RPL3P39023 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPL3P39023 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
RPL3P39023 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RPL3P39023 Y_RNA.167-201ENST00000363735 109 ntBASIC3.14□□□□□ -1.91
RPL3P39023 AL162578.1-201ENST00000406202 378 ntBASIC3.14□□□□□ -1.91
RPL3P39023 RNU4-46P-201ENST00000410818 138 ntBASIC3.14□□□□□ -1.91
RPL3P39023 RPS12P24-201ENST00000412619 387 ntBASIC3.14□□□□□ -1.91
RPL3P39023 EEF1A1P40-201ENST00000412883 573 ntBASIC3.14□□□□□ -1.91
RPL3P39023 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.14□□□□□ -1.91
RPL3P39023 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.14□□□□□ -1.91
RPL3P39023 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms