Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXC13P31276 AC092954.2-201ENST00000609103 430 ntBASIC3.24□□□□□ -1.89
HOXC13P31276 AC063943.3-201ENST00000615562 356 ntBASIC3.24□□□□□ -1.89
HOXC13P31276 AC126177.8-201ENST00000618339 1015 ntBASIC3.24□□□□□ -1.89
HOXC13P31276 AL158801.5-201ENST00000623123 465 ntBASIC3.24□□□□□ -1.89
HOXC13P31276 AC112204.3-201ENST00000623822 332 ntBASIC3.24□□□□□ -1.89
HOXC13P31276 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXC13P31276 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXC13P31276 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXC13P31276 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
HOXC13P31276 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HOXC13P31276 OR5J1P-201ENST00000313544 939 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 OR4G2P-201ENST00000328113 903 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 RNU4-21P-201ENST00000362802 126 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 U8.9-201ENST00000365667 134 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 RNU6-769P-201ENST00000384407 104 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 RNU6-1011P-201ENST00000384668 107 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
HOXC13P31276 RNA5SP293-201ENST00000410527 113 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 RN7SKP140-201ENST00000411196 284 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 HMGN1P14-201ENST00000412459 517 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 MTND1P14-201ENST00000427400 950 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.23□□□□□ -1.89
HOXC13P31276 UBE2V1P8-201ENST00000437166 265 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 RPL21P2-201ENST00000440049 481 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 RPL7P36-201ENST00000444633 681 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 RPS15AP27-201ENST00000449183 343 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.23□□□□□ -1.89
HOXC13P31276 AMD1P1-201ENST00000457220 922 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.23□□□□□ -1.89
HOXC13P31276 RPL31P58-201ENST00000469001 379 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 RN7SL432P-201ENST00000484057 298 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.23□□□□□ -1.89
HOXC13P31276 AC010486.1-201ENST00000511793 424 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 TTC39CP1-201ENST00000512513 755 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.23□□□□□ -1.89
HOXC13P31276 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.23□□□□□ -1.89
HOXC13P31276 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.23□□□□□ -1.89
HOXC13P31276 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.23□□□□□ -1.89
HOXC13P31276 AC118273.2-201ENST00000532092 465 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HOXC13P31276 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.23□□□□□ -1.89
HOXC13P31276 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.23□□□□□ -1.89
HOXC13P31276 TRAV28-201ENST00000557548 323 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.23□□□□□ -1.89
HOXC13P31276 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.23□□□□□ -1.89
HOXC13P31276 TPMTP1-201ENST00000592307 737 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 AC112187.2-201ENST00000604345 283 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 RPL23AP88-201ENST00000605759 454 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 AC004908.2-201ENST00000609090 574 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 AC090970.3-201ENST00000612566 866 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.23□□□□□ -1.89
HOXC13P31276 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HOXC13P31276 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HOXC13P31276 MTND4P16-201ENST00000466108 1367 ntBASIC3.23□□□□□ -1.89
HOXC13P31276 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.23□□□□□ -1.89
HOXC13P31276 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXC13P31276 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.22□□□□□ -1.89
HOXC13P31276 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXC13P31276 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HOXC13P31276 RNU6-7-201ENST00000364784 107 ntBASIC3.22□□□□□ -1.89
HOXC13P31276 RNU1-140P-201ENST00000365040 165 ntBASIC3.22□□□□□ -1.89
HOXC13P31276 RNU6-8-201ENST00000365467 107 ntBASIC3.22□□□□□ -1.89
HOXC13P31276 RNU6-805P-201ENST00000365643 106 ntBASIC3.22□□□□□ -1.89
HOXC13P31276 SNORA75-201ENST00000384158 137 ntBASIC3.22□□□□□ -1.89
HOXC13P31276 AC110754.1-201ENST00000399740 601 ntBASIC3.22□□□□□ -1.89
HOXC13P31276 AL109755.1-201ENST00000401791 649 ntBASIC3.22□□□□□ -1.89
HOXC13P31276 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.22□□□□□ -1.89
HOXC13P31276 AC099548.1-201ENST00000421443 426 ntBASIC3.22□□□□□ -1.89
HOXC13P31276 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.22□□□□□ -1.89
HOXC13P31276 AC098614.2-201ENST00000426040 255 ntBASIC3.22□□□□□ -1.89
HOXC13P31276 OR2AS1P-201ENST00000427827 319 ntBASIC3.22□□□□□ -1.89
HOXC13P31276 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.22□□□□□ -1.89
HOXC13P31276 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXC13P31276 AL049734.2-201ENST00000441066 616 ntBASIC3.22□□□□□ -1.89
HOXC13P31276 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.22□□□□□ -1.89
HOXC13P31276 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXC13P31276 MTND2P33-201ENST00000506452 1031 ntBASIC3.22□□□□□ -1.89
HOXC13P31276 AC113155.1-201ENST00000511141 769 ntBASIC3.22□□□□□ -1.89
HOXC13P31276 RNA5SP356-201ENST00000515972 94 ntBASIC3.22□□□□□ -1.89
HOXC13P31276 RNU6-507P-201ENST00000516045 100 ntBASIC3.22□□□□□ -1.89
HOXC13P31276 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.22□□□□□ -1.89
HOXC13P31276 AC106038.2-201ENST00000520706 568 ntBASIC3.22□□□□□ -1.89
HOXC13P31276 PSMA2P1-201ENST00000526365 646 ntBASIC3.22□□□□□ -1.89
HOXC13P31276 AP001646.1-201ENST00000527936 915 ntBASIC3.22□□□□□ -1.89
HOXC13P31276 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXC13P31276 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.22□□□□□ -1.89
HOXC13P31276 AC068790.3-201ENST00000602988 553 ntBASIC3.22□□□□□ -1.89
HOXC13P31276 NDUFA8P1-201ENST00000605525 367 ntBASIC3.22□□□□□ -1.89
HOXC13P31276 AC093732.2-201ENST00000607950 274 ntBASIC3.22□□□□□ -1.89
HOXC13P31276 SDR42E1P2-201ENST00000614861 481 ntBASIC3.22□□□□□ -1.89
HOXC13P31276 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.22□□□□□ -1.89
HOXC13P31276 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
HOXC13P31276 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXC13P31276 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXC13P31276 AC004944.1-201ENST00000517807 3059 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.21□□□□□ -1.9
HOXC13P31276 AL035425.3-201ENST00000564206 4996 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
HOXC13P31276 RNU6-270P-201ENST00000364131 105 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms