Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.22□□□□□ -1.89
HOXC8P31273 AC008481.1-201ENST00000463278 396 ntBASIC3.22□□□□□ -1.89
HOXC8P31273 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXC8P31273 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.22□□□□□ -1.89
HOXC8P31273 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXC8P31273 AC010265.1-201ENST00000513509 211 ntBASIC3.22□□□□□ -1.89
HOXC8P31273 SCGB1D5P-201ENST00000515134 247 ntBASIC3.22□□□□□ -1.89
HOXC8P31273 Y_RNA.672-201ENST00000516289 104 ntBASIC3.22□□□□□ -1.89
HOXC8P31273 RNU6-201P-201ENST00000517100 61 ntBASIC3.22□□□□□ -1.89
HOXC8P31273 MTCO2P4-201ENST00000517968 247 ntBASIC3.22□□□□□ -1.89
HOXC8P31273 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.22□□□□□ -1.89
HOXC8P31273 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.22□□□□□ -1.89
HOXC8P31273 MIR3682-201ENST00000581338 84 ntBASIC3.22□□□□□ -1.89
HOXC8P31273 AF250324.2-201ENST00000608299 610 ntBASIC3.22□□□□□ -1.89
HOXC8P31273 AL355472.4-201ENST00000610233 626 ntBASIC3.22□□□□□ -1.89
HOXC8P31273 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.22□□□□□ -1.89
HOXC8P31273 AL049641.1-201ENST00000441055 1948 ntBASIC3.22□□□□□ -1.89
HOXC8P31273 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.22□□□□□ -1.89
HOXC8P31273 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXC8P31273 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
HOXC8P31273 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HOXC8P31273 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
HOXC8P31273 MIR449A-201ENST00000362113 91 ntBASIC3.21□□□□□ -1.9
HOXC8P31273 RNA5SP139-201ENST00000364340 117 ntBASIC3.21□□□□□ -1.9
HOXC8P31273 Y_RNA.296-201ENST00000364930 108 ntBASIC3.21□□□□□ -1.9
HOXC8P31273 AL360182.1-201ENST00000397433 468 ntBASIC3.21□□□□□ -1.9
HOXC8P31273 RPL21P24-201ENST00000413752 448 ntBASIC3.21□□□□□ -1.9
HOXC8P31273 AC012498.1-201ENST00000424037 437 ntBASIC3.21□□□□□ -1.9
HOXC8P31273 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXC8P31273 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXC8P31273 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXC8P31273 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.21□□□□□ -1.9
HOXC8P31273 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.21□□□□□ -1.9
HOXC8P31273 AC010099.1-201ENST00000455434 375 ntBASIC3.21□□□□□ -1.9
HOXC8P31273 snoU13.28-201ENST00000459235 104 ntBASIC3.21□□□□□ -1.9
HOXC8P31273 RPS26P21-201ENST00000475397 348 ntBASIC3.21□□□□□ -1.9
HOXC8P31273 AC091133.4-201ENST00000511142 308 ntBASIC3.21□□□□□ -1.9
HOXC8P31273 RNU6-314P-201ENST00000516574 104 ntBASIC3.21□□□□□ -1.9
HOXC8P31273 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.21□□□□□ -1.9
HOXC8P31273 AL133153.1-201ENST00000557756 303 ntBASIC3.21□□□□□ -1.9
HOXC8P31273 DUXAP4-201ENST00000603046 613 ntBASIC3.21□□□□□ -1.9
HOXC8P31273 AC004832.5-201ENST00000608677 401 ntBASIC3.21□□□□□ -1.9
HOXC8P31273 AC007684.1-201ENST00000609671 477 ntBASIC3.21□□□□□ -1.9
HOXC8P31273 AC068944.2-201ENST00000610373 403 ntBASIC3.21□□□□□ -1.9
HOXC8P31273 AC090970.3-201ENST00000612566 866 ntBASIC3.21□□□□□ -1.9
HOXC8P31273 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXC8P31273 AL158209.2-201ENST00000619266 216 ntBASIC3.21□□□□□ -1.9
HOXC8P31273 AC012150.2-201ENST00000621300 544 ntBASIC3.21□□□□□ -1.9
HOXC8P31273 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HOXC8P31273 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
HOXC8P31273 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
HOXC8P31273 U3.11-201ENST00000364476 212 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HOXC8P31273 RNU6-1035P-201ENST00000384477 107 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 MRPL42P2-201ENST00000403169 426 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 AL513331.1-201ENST00000411908 397 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 Z85995.1-201ENST00000415547 335 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXC8P31273 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.2□□□□□ -1.9
HOXC8P31273 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXC8P31273 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXC8P31273 OR2AS1P-201ENST00000427827 319 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 RPL31P35-201ENST00000431058 377 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.2□□□□□ -1.9
HOXC8P31273 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXC8P31273 AL451074.3-201ENST00000437709 472 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 AL049734.2-201ENST00000441066 616 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 AC079448.1-201ENST00000449377 373 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXC8P31273 AC108059.3-201ENST00000456388 214 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 RN7SL429P-201ENST00000479090 223 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 RN7SL489P-201ENST00000486185 223 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 RN7SL327P-201ENST00000488659 223 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 RNU6-928P-201ENST00000516876 104 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.2□□□□□ -1.9
HOXC8P31273 AC093012.1-202ENST00000549403 582 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXC8P31273 TPRKBP2-201ENST00000565969 475 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 AL356432.3-201ENST00000568952 465 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 AL391840.1-201ENST00000571144 367 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXC8P31273 AC005951.2-201ENST00000576282 495 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 NUTF2P8-201ENST00000604593 363 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 AL022154.1-201ENST00000604698 785 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 AC121334.2-201ENST00000605387 271 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 AC004852.3-201ENST00000614131 326 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 RN7SL853P-201ENST00000617250 223 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 AC091953.2-201ENST00000623979 160 ntBASIC3.2□□□□□ -1.9
HOXC8P31273 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HOXC8P31273 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HOXC8P31273 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXC8P31273 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HOXC8P31273 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HOXC8P31273 Y_RNA.554-201ENST00000384672 102 ntBASIC3.19□□□□□ -1.9
HOXC8P31273 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXC8P31273 MTCYBP5-201ENST00000423752 1135 ntBASIC3.19□□□□□ -1.9
HOXC8P31273 AC019097.1-201ENST00000424783 735 ntBASIC3.19□□□□□ -1.9
HOXC8P31273 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXC8P31273 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXC8P31273 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms