Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 JTBP1-201ENST00000441314 247 ntBASIC1.08□□□□□ -2.24
CLIP1P30622 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.08□□□□□ -2.24
CLIP1P30622 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
CLIP1P30622 LARP7P4-201ENST00000481075 878 ntBASIC1.08□□□□□ -2.24
CLIP1P30622 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CLIP1P30622 MTND2P26-201ENST00000528255 1029 ntBASIC1.08□□□□□ -2.24
CLIP1P30622 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.08□□□□□ -2.24
CLIP1P30622 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.08□□□□□ -2.24
CLIP1P30622 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.08□□□□□ -2.24
CLIP1P30622 AC005786.1-201ENST00000588553 154 ntBASIC1.08□□□□□ -2.24
CLIP1P30622 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CLIP1P30622 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.07□□□□□ -2.24
CLIP1P30622 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CLIP1P30622 RPL7L1P10-201ENST00000427790 463 ntBASIC1.07□□□□□ -2.24
CLIP1P30622 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.07□□□□□ -2.24
CLIP1P30622 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.07□□□□□ -2.24
CLIP1P30622 AC105313.1-201ENST00000509121 353 ntBASIC1.07□□□□□ -2.24
CLIP1P30622 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.07□□□□□ -2.24
CLIP1P30622 RNA5SP165-201ENST00000517142 115 ntBASIC1.07□□□□□ -2.24
CLIP1P30622 AC084373.1-201ENST00000603311 235 ntBASIC1.07□□□□□ -2.24
CLIP1P30622 AC103710.4-201ENST00000609301 899 ntBASIC1.07□□□□□ -2.24
CLIP1P30622 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CLIP1P30622 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.07□□□□□ -2.24
CLIP1P30622 RNA5SP62-201ENST00000363457 110 ntBASIC1.06□□□□□ -2.24
CLIP1P30622 AL158823.1-201ENST00000418441 478 ntBASIC1.06□□□□□ -2.24
CLIP1P30622 RPL27AP8-201ENST00000424277 446 ntBASIC1.06□□□□□ -2.24
CLIP1P30622 C1DP3-201ENST00000455013 423 ntBASIC1.06□□□□□ -2.24
CLIP1P30622 BX248409.1-201ENST00000455497 255 ntBASIC1.06□□□□□ -2.24
CLIP1P30622 RNU7-27P-201ENST00000459281 62 ntBASIC1.06□□□□□ -2.24
CLIP1P30622 RPS27P23-201ENST00000487608 251 ntBASIC1.06□□□□□ -2.24
CLIP1P30622 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.06□□□□□ -2.24
CLIP1P30622 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.06□□□□□ -2.24
CLIP1P30622 AC087359.1-201ENST00000508335 1740 ntBASIC1.06□□□□□ -2.24
CLIP1P30622 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CLIP1P30622 AC112198.4-201ENST00000515450 351 ntBASIC1.06□□□□□ -2.24
CLIP1P30622 MIR5571-201ENST00000577998 113 ntBASIC1.06□□□□□ -2.24
CLIP1P30622 AC005498.1-201ENST00000592125 465 ntBASIC1.06□□□□□ -2.24
CLIP1P30622 AC096586.2-201ENST00000610260 441 ntBASIC1.06□□□□□ -2.24
CLIP1P30622 AL109933.3-201ENST00000619095 188 ntBASIC1.06□□□□□ -2.24
CLIP1P30622 AC090517.3-201ENST00000625170 141 ntBASIC1.06□□□□□ -2.24
CLIP1P30622 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.06□□□□□ -2.24
CLIP1P30622 MTND5P9-201ENST00000503854 1755 ntBASIC1.06□□□□□ -2.24
CLIP1P30622 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CLIP1P30622 RNU6-1235P-201ENST00000384559 107 ntBASIC1.06□□□□□ -2.24
CLIP1P30622 U3.29-201ENST00000391296 212 ntBASIC1.06□□□□□ -2.24
CLIP1P30622 RNU2-21P-201ENST00000410368 188 ntBASIC1.06□□□□□ -2.24
CLIP1P30622 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.06□□□□□ -2.24
CLIP1P30622 RPL7P34-201ENST00000433316 712 ntBASIC1.06□□□□□ -2.24
CLIP1P30622 AL031663.1-201ENST00000437445 219 ntBASIC1.06□□□□□ -2.24
CLIP1P30622 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.06□□□□□ -2.24
CLIP1P30622 RNU6-498P-201ENST00000459468 107 ntBASIC1.06□□□□□ -2.24
CLIP1P30622 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.06□□□□□ -2.24
CLIP1P30622 AP003485.1-201ENST00000625093 753 ntBASIC1.06□□□□□ -2.24
CLIP1P30622 AC010487.4-201ENST00000637027 61 ntBASIC1.06□□□□□ -2.24
CLIP1P30622 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
CLIP1P30622 RNU6-716P-201ENST00000365621 103 ntBASIC1.05□□□□□ -2.24
CLIP1P30622 AL589655.1-201ENST00000405398 482 ntBASIC1.05□□□□□ -2.24
CLIP1P30622 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.05□□□□□ -2.24
CLIP1P30622 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.05□□□□□ -2.24
CLIP1P30622 AL645638.1-201ENST00000440519 361 ntBASIC1.05□□□□□ -2.24
CLIP1P30622 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.05□□□□□ -2.24
CLIP1P30622 RPL39P29-201ENST00000447779 157 ntBASIC1.05□□□□□ -2.24
CLIP1P30622 MIR4711-201ENST00000578274 70 ntBASIC1.05□□□□□ -2.24
CLIP1P30622 AC021749.1-201ENST00000604322 607 ntBASIC1.05□□□□□ -2.24
CLIP1P30622 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.05□□□□□ -2.24
CLIP1P30622 AC022513.1-201ENST00000624512 117 ntBASIC1.05□□□□□ -2.24
CLIP1P30622 AL589743.1-201ENST00000551932 2712 ntBASIC1.05□□□□□ -2.24
CLIP1P30622 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CLIP1P30622 RNU6-492P-201ENST00000363035 104 ntBASIC1.04□□□□□ -2.24
CLIP1P30622 RNA5SP499-201ENST00000363982 119 ntBASIC1.04□□□□□ -2.24
CLIP1P30622 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.04□□□□□ -2.24
CLIP1P30622 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.04□□□□□ -2.24
CLIP1P30622 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.04□□□□□ -2.24
CLIP1P30622 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CLIP1P30622 RNA5SP476-201ENST00000516613 103 ntBASIC1.04□□□□□ -2.24
CLIP1P30622 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.04□□□□□ -2.24
CLIP1P30622 CYP4A27P-201ENST00000567218 190 ntBASIC1.04□□□□□ -2.24
CLIP1P30622 MIR3609-201ENST00000582661 80 ntBASIC1.04□□□□□ -2.24
CLIP1P30622 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.03□□□□□ -2.24
CLIP1P30622 RNU6-532P-201ENST00000384318 107 ntBASIC1.03□□□□□ -2.24
CLIP1P30622 RNU6-837P-201ENST00000391056 108 ntBASIC1.03□□□□□ -2.24
CLIP1P30622 AC244636.1-201ENST00000421152 228 ntBASIC1.03□□□□□ -2.24
CLIP1P30622 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.03□□□□□ -2.24
CLIP1P30622 AC092393.1-201ENST00000439625 742 ntBASIC1.03□□□□□ -2.24
CLIP1P30622 AC079448.1-201ENST00000449377 373 ntBASIC1.03□□□□□ -2.24
CLIP1P30622 FAM206BP-201ENST00000510179 541 ntBASIC1.03□□□□□ -2.24
CLIP1P30622 MRPS36P2-201ENST00000512569 299 ntBASIC1.03□□□□□ -2.24
CLIP1P30622 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.03□□□□□ -2.24
CLIP1P30622 AC115085.1-201ENST00000588924 229 ntBASIC1.03□□□□□ -2.24
CLIP1P30622 AC055764.2-201ENST00000610089 670 ntBASIC1.03□□□□□ -2.24
CLIP1P30622 AP002791.1-201ENST00000623291 381 ntBASIC1.03□□□□□ -2.24
CLIP1P30622 MIR924-201ENST00000638017 53 ntBASIC1.03□□□□□ -2.24
CLIP1P30622 MIR330-201ENST00000362196 94 ntBASIC1.02□□□□□ -2.25
CLIP1P30622 RNU1-72P-201ENST00000362976 153 ntBASIC1.02□□□□□ -2.25
CLIP1P30622 RNU6-942P-201ENST00000363002 107 ntBASIC1.02□□□□□ -2.25
CLIP1P30622 RNU6-198P-201ENST00000384258 104 ntBASIC1.02□□□□□ -2.25
CLIP1P30622 RNA5SP193-201ENST00000410353 107 ntBASIC1.02□□□□□ -2.25
CLIP1P30622 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CLIP1P30622 NUP35P2-201ENST00000416748 943 ntBASIC1.02□□□□□ -2.25
CLIP1P30622 AC087588.1-201ENST00000462203 316 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms