Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC018630.2-202ENST00000422992 927 ntBASIC3.11□□□□□ -1.91
CDH1P12830 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH1P12830 AC005326.1-201ENST00000429197 123 ntBASIC3.11□□□□□ -1.91
CDH1P12830 AC244505.4-201ENST00000434905 287 ntBASIC3.11□□□□□ -1.91
CDH1P12830 RPL36AP6-201ENST00000435770 321 ntBASIC3.11□□□□□ -1.91
CDH1P12830 SSXP5-201ENST00000443473 287 ntBASIC3.11□□□□□ -1.91
CDH1P12830 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDH1P12830 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.11□□□□□ -1.91
CDH1P12830 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.11□□□□□ -1.91
CDH1P12830 RNU7-182P-201ENST00000459009 62 ntBASIC3.11□□□□□ -1.91
CDH1P12830 AC091179.1-201ENST00000461606 579 ntBASIC3.11□□□□□ -1.91
CDH1P12830 AC091153.1-201ENST00000466297 402 ntBASIC3.11□□□□□ -1.91
CDH1P12830 GMFBP1-201ENST00000467831 427 ntBASIC3.11□□□□□ -1.91
CDH1P12830 RPL7P49-201ENST00000471402 708 ntBASIC3.11□□□□□ -1.91
CDH1P12830 AC074250.1-201ENST00000511117 192 ntBASIC3.11□□□□□ -1.91
CDH1P12830 RNA5SP401-201ENST00000515920 127 ntBASIC3.11□□□□□ -1.91
CDH1P12830 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH1P12830 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH1P12830 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.11□□□□□ -1.91
CDH1P12830 AC055876.1-202ENST00000567053 138 ntBASIC3.11□□□□□ -1.91
CDH1P12830 AP001029.3-201ENST00000588063 596 ntBASIC3.11□□□□□ -1.91
CDH1P12830 AL670379.6-201ENST00000603753 252 ntBASIC3.11□□□□□ -1.91
CDH1P12830 AL670379.11-201ENST00000604059 253 ntBASIC3.11□□□□□ -1.91
CDH1P12830 AC008162.1-201ENST00000604718 254 ntBASIC3.11□□□□□ -1.91
CDH1P12830 AL670379.1-201ENST00000604752 252 ntBASIC3.11□□□□□ -1.91
CDH1P12830 AL670379.5-201ENST00000605253 252 ntBASIC3.11□□□□□ -1.91
CDH1P12830 AL670379.12-201ENST00000605291 253 ntBASIC3.11□□□□□ -1.91
CDH1P12830 AL670379.8-201ENST00000605353 252 ntBASIC3.11□□□□□ -1.91
CDH1P12830 AL670379.7-201ENST00000605823 252 ntBASIC3.11□□□□□ -1.91
CDH1P12830 RMST_3.1-201ENST00000611651 109 ntBASIC3.11□□□□□ -1.91
CDH1P12830 SDR42E1P2-201ENST00000614861 481 ntBASIC3.11□□□□□ -1.91
CDH1P12830 AP001486.3-201ENST00000615334 372 ntBASIC3.11□□□□□ -1.91
CDH1P12830 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CDH1P12830 AC091903.1-201ENST00000624322 454 ntBASIC3.11□□□□□ -1.91
CDH1P12830 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH1P12830 AC024614.3-201ENST00000637860 256 ntBASIC3.11□□□□□ -1.91
CDH1P12830 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH1P12830 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH1P12830 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDH1P12830 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDH1P12830 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.11□□□□□ -1.91
CDH1P12830 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDH1P12830 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDH1P12830 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDH1P12830 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDH1P12830 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CDH1P12830 SNORA63.1-201ENST00000362493 131 ntBASIC3.1□□□□□ -1.91
CDH1P12830 RNU6-173P-201ENST00000364215 104 ntBASIC3.1□□□□□ -1.91
CDH1P12830 RNA5SP267-201ENST00000364893 126 ntBASIC3.1□□□□□ -1.91
CDH1P12830 RNU6-61P-201ENST00000365528 109 ntBASIC3.1□□□□□ -1.91
CDH1P12830 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CDH1P12830 RNU6-701P-201ENST00000384059 107 ntBASIC3.1□□□□□ -1.91
CDH1P12830 RNU6-1181P-201ENST00000384191 106 ntBASIC3.1□□□□□ -1.91
CDH1P12830 NDUFS5P1-201ENST00000405668 289 ntBASIC3.1□□□□□ -1.91
CDH1P12830 RNU6-1068P-201ENST00000410958 103 ntBASIC3.1□□□□□ -1.91
CDH1P12830 OR9R1P-201ENST00000412200 877 ntBASIC3.1□□□□□ -1.91
CDH1P12830 MTCYBP8-201ENST00000422855 651 ntBASIC3.1□□□□□ -1.91
CDH1P12830 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH1P12830 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.1□□□□□ -1.91
CDH1P12830 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.1□□□□□ -1.91
CDH1P12830 AL353705.1-201ENST00000433468 480 ntBASIC3.1□□□□□ -1.91
CDH1P12830 CALM1P1-201ENST00000442082 433 ntBASIC3.1□□□□□ -1.91
CDH1P12830 AC073415.1-201ENST00000449240 153 ntBASIC3.1□□□□□ -1.91
CDH1P12830 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.1□□□□□ -1.91
CDH1P12830 RN7SL75P-201ENST00000461926 281 ntBASIC3.1□□□□□ -1.91
CDH1P12830 HSPE1P6-201ENST00000479457 291 ntBASIC3.1□□□□□ -1.91
CDH1P12830 VN1R104P-201ENST00000505115 1009 ntBASIC3.1□□□□□ -1.91
CDH1P12830 AC110794.1-201ENST00000505816 425 ntBASIC3.1□□□□□ -1.91
CDH1P12830 AC105417.1-201ENST00000514691 285 ntBASIC3.1□□□□□ -1.91
CDH1P12830 RNU6-390P-201ENST00000516259 103 ntBASIC3.1□□□□□ -1.91
CDH1P12830 RN7SKP219-201ENST00000516825 296 ntBASIC3.1□□□□□ -1.91
CDH1P12830 AP006587.4-201ENST00000526053 529 ntBASIC3.1□□□□□ -1.91
CDH1P12830 AP005435.4-201ENST00000529514 284 ntBASIC3.1□□□□□ -1.91
CDH1P12830 OR5B19P-201ENST00000531766 928 ntBASIC3.1□□□□□ -1.91
CDH1P12830 SNRPGP16-201ENST00000533275 226 ntBASIC3.1□□□□□ -1.91
CDH1P12830 HIF1AP1-201ENST00000553642 175 ntBASIC3.1□□□□□ -1.91
CDH1P12830 AL121579.1-201ENST00000555129 305 ntBASIC3.1□□□□□ -1.91
CDH1P12830 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.1□□□□□ -1.91
CDH1P12830 MIR2682-201ENST00000580305 110 ntBASIC3.1□□□□□ -1.91
CDH1P12830 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.1□□□□□ -1.91
CDH1P12830 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH1P12830 AL591516.1-201ENST00000611326 274 ntBASIC3.1□□□□□ -1.91
CDH1P12830 AC010133.1-201ENST00000615809 842 ntBASIC3.1□□□□□ -1.91
CDH1P12830 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.1□□□□□ -1.91
CDH1P12830 AC022306.2-201ENST00000617563 647 ntBASIC3.1□□□□□ -1.91
CDH1P12830 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH1P12830 CASC19-280ENST00000642102 1351 ntBASIC3.1□□□□□ -1.91
CDH1P12830 AC093831.2-201ENST00000624393 3427 ntBASIC3.09□□□□□ -1.91
CDH1P12830 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDH1P12830 AL137003.2-201ENST00000606924 2538 ntBASIC3.09□□□□□ -1.91
CDH1P12830 AL139276.1-201ENST00000311910 1001 ntBASIC3.09□□□□□ -1.91
CDH1P12830 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDH1P12830 RNU6-179P-201ENST00000363350 107 ntBASIC3.09□□□□□ -1.91
CDH1P12830 RNU6-946P-201ENST00000383878 107 ntBASIC3.09□□□□□ -1.91
CDH1P12830 MT-TL1-201ENST00000386347 75 ntBASIC3.09□□□□□ -1.91
CDH1P12830 AL158156.1-201ENST00000422509 473 ntBASIC3.09□□□□□ -1.91
CDH1P12830 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.09□□□□□ -1.91
CDH1P12830 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH1P12830 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDH1P12830 Z75741.1-201ENST00000446793 314 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms