Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 ELOCP7-201ENST00000439968 331 ntBASIC3.24□□□□□ -1.89
MMP2P08253 MTND4P25-201ENST00000441039 533 ntBASIC3.24□□□□□ -1.89
MMP2P08253 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.24□□□□□ -1.89
MMP2P08253 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.24□□□□□ -1.89
MMP2P08253 AC009237.8-201ENST00000445492 379 ntBASIC3.24□□□□□ -1.89
MMP2P08253 CBWD4P-201ENST00000445695 655 ntBASIC3.24□□□□□ -1.89
MMP2P08253 DDX3P2-201ENST00000446138 111 ntBASIC3.24□□□□□ -1.89
MMP2P08253 FDX1P2-201ENST00000450769 375 ntBASIC3.24□□□□□ -1.89
MMP2P08253 AC003071.1-201ENST00000451219 789 ntBASIC3.24□□□□□ -1.89
MMP2P08253 RPS29P15-201ENST00000458329 171 ntBASIC3.24□□□□□ -1.89
MMP2P08253 RNU6-953P-201ENST00000459154 107 ntBASIC3.24□□□□□ -1.89
MMP2P08253 RPL21P8-201ENST00000465083 535 ntBASIC3.24□□□□□ -1.89
MMP2P08253 RPL7P49-201ENST00000471402 708 ntBASIC3.24□□□□□ -1.89
MMP2P08253 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.24□□□□□ -1.89
MMP2P08253 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.24□□□□□ -1.89
MMP2P08253 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.24□□□□□ -1.89
MMP2P08253 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.24□□□□□ -1.89
MMP2P08253 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.24□□□□□ -1.89
MMP2P08253 OR5AQ1P-201ENST00000527596 927 ntBASIC3.24□□□□□ -1.89
MMP2P08253 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
MMP2P08253 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.24□□□□□ -1.89
MMP2P08253 AL512310.1-201ENST00000548639 172 ntBASIC3.24□□□□□ -1.89
MMP2P08253 AP001094.1-201ENST00000579805 193 ntBASIC3.24□□□□□ -1.89
MMP2P08253 MIR4775-201ENST00000581168 75 ntBASIC3.24□□□□□ -1.89
MMP2P08253 AL158032.1-201ENST00000605401 106 ntBASIC3.24□□□□□ -1.89
MMP2P08253 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.24□□□□□ -1.89
MMP2P08253 U6.114-201ENST00000636407 96 ntBASIC3.24□□□□□ -1.89
MMP2P08253 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.24□□□□□ -1.89
MMP2P08253 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
MMP2P08253 AC093010.3-201ENST00000570269 15214 ntBASIC3.23□□□□□ -1.89
MMP2P08253 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
MMP2P08253 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
MMP2P08253 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.23□□□□□ -1.89
MMP2P08253 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.23□□□□□ -1.89
MMP2P08253 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.23□□□□□ -1.89
MMP2P08253 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
MMP2P08253 RNA5SP72-201ENST00000364442 117 ntBASIC3.23□□□□□ -1.89
MMP2P08253 RNU6-61P-201ENST00000365528 109 ntBASIC3.23□□□□□ -1.89
MMP2P08253 Y_RNA.402-201ENST00000383972 102 ntBASIC3.23□□□□□ -1.89
MMP2P08253 RNU6-483P-201ENST00000384088 108 ntBASIC3.23□□□□□ -1.89
MMP2P08253 RNU6-190P-201ENST00000384154 102 ntBASIC3.23□□□□□ -1.89
MMP2P08253 AL139397.2-201ENST00000404529 772 ntBASIC3.23□□□□□ -1.89
MMP2P08253 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.23□□□□□ -1.89
MMP2P08253 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.23□□□□□ -1.89
MMP2P08253 AC006946.1-201ENST00000429106 328 ntBASIC3.23□□□□□ -1.89
MMP2P08253 AC007919.1-201ENST00000429380 217 ntBASIC3.23□□□□□ -1.89
MMP2P08253 AC092573.2-201ENST00000434546 243 ntBASIC3.23□□□□□ -1.89
MMP2P08253 TAAR7P-201ENST00000436141 242 ntBASIC3.23□□□□□ -1.89
MMP2P08253 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.23□□□□□ -1.89
MMP2P08253 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.23□□□□□ -1.89
MMP2P08253 ELOCP23-201ENST00000452014 332 ntBASIC3.23□□□□□ -1.89
MMP2P08253 AL356010.1-201ENST00000456364 102 ntBASIC3.23□□□□□ -1.89
MMP2P08253 Y_RNA.689-201ENST00000516589 107 ntBASIC3.23□□□□□ -1.89
MMP2P08253 RNU6-677P-201ENST00000516914 101 ntBASIC3.23□□□□□ -1.89
MMP2P08253 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.23□□□□□ -1.89
MMP2P08253 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.23□□□□□ -1.89
MMP2P08253 AC034105.3-201ENST00000565294 442 ntBASIC3.23□□□□□ -1.89
MMP2P08253 AC008752.3-201ENST00000588113 712 ntBASIC3.23□□□□□ -1.89
MMP2P08253 AC093788.1-201ENST00000609356 927 ntBASIC3.23□□□□□ -1.89
MMP2P08253 uc_338.25-201ENST00000613756 156 ntBASIC3.23□□□□□ -1.89
MMP2P08253 AC034102.8-201ENST00000615146 484 ntBASIC3.23□□□□□ -1.89
MMP2P08253 AC092628.2-201ENST00000622492 339 ntBASIC3.23□□□□□ -1.89
MMP2P08253 AP003122.6-201ENST00000623831 495 ntBASIC3.23□□□□□ -1.89
MMP2P08253 AC091903.1-201ENST00000624322 454 ntBASIC3.23□□□□□ -1.89
MMP2P08253 SNORA50A-202ENST00000629536 136 ntBASIC3.23□□□□□ -1.89
MMP2P08253 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
MMP2P08253 GABRG2-229ENST00000641017 3628 ntBASIC3.23□□□□□ -1.89
MMP2P08253 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.23□□□□□ -1.89
MMP2P08253 RIOK3P1-201ENST00000418778 1528 ntBASIC3.23□□□□□ -1.89
MMP2P08253 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
MMP2P08253 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
MMP2P08253 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
MMP2P08253 API5P2-201ENST00000397055 1498 ntBASIC3.22□□□□□ -1.89
MMP2P08253 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.22□□□□□ -1.89
MMP2P08253 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.22□□□□□ -1.89
MMP2P08253 SNORD56.3-201ENST00000363507 71 ntBASIC3.22□□□□□ -1.89
MMP2P08253 SNORD46.1-201ENST00000364139 104 ntBASIC3.22□□□□□ -1.89
MMP2P08253 MIR34B-201ENST00000385076 84 ntBASIC3.22□□□□□ -1.89
MMP2P08253 RNU6-817P-201ENST00000391083 104 ntBASIC3.22□□□□□ -1.89
MMP2P08253 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
MMP2P08253 CIR1P3-201ENST00000405137 479 ntBASIC3.22□□□□□ -1.89
MMP2P08253 RNA5SP44-201ENST00000410446 133 ntBASIC3.22□□□□□ -1.89
MMP2P08253 AC092809.3-201ENST00000415453 231 ntBASIC3.22□□□□□ -1.89
MMP2P08253 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.22□□□□□ -1.89
MMP2P08253 RPL31P12-201ENST00000422587 358 ntBASIC3.22□□□□□ -1.89
MMP2P08253 MTCO1P20-201ENST00000425366 358 ntBASIC3.22□□□□□ -1.89
MMP2P08253 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.22□□□□□ -1.89
MMP2P08253 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.22□□□□□ -1.89
MMP2P08253 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.22□□□□□ -1.89
MMP2P08253 PIGFP3-201ENST00000441918 722 ntBASIC3.22□□□□□ -1.89
MMP2P08253 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.22□□□□□ -1.89
MMP2P08253 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.22□□□□□ -1.89
MMP2P08253 RNU6-420P-201ENST00000458780 107 ntBASIC3.22□□□□□ -1.89
MMP2P08253 AC087588.1-201ENST00000462203 316 ntBASIC3.22□□□□□ -1.89
MMP2P08253 RN7SL601P-201ENST00000471221 293 ntBASIC3.22□□□□□ -1.89
MMP2P08253 RPL7P5-201ENST00000471472 736 ntBASIC3.22□□□□□ -1.89
MMP2P08253 AC083798.1-201ENST00000472671 131 ntBASIC3.22□□□□□ -1.89
MMP2P08253 RPS20P22-201ENST00000473700 357 ntBASIC3.22□□□□□ -1.89
MMP2P08253 AC110794.1-201ENST00000505816 425 ntBASIC3.22□□□□□ -1.89
MMP2P08253 SNORA64.4-201ENST00000516632 81 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms