Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 MIR607-201ENST00000385241 96 ntBASIC2.1□□□□□ -2.07
COL1A2P08123 RNU6-952P-201ENST00000391164 108 ntBASIC2.1□□□□□ -2.07
COL1A2P08123 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.1□□□□□ -2.07
COL1A2P08123 AC244035.1-201ENST00000430042 390 ntBASIC2.1□□□□□ -2.07
COL1A2P08123 LSM1P1-201ENST00000438629 273 ntBASIC2.1□□□□□ -2.07
COL1A2P08123 MTND1P30-201ENST00000441241 901 ntBASIC2.1□□□□□ -2.07
COL1A2P08123 MTND1P29-201ENST00000448112 647 ntBASIC2.1□□□□□ -2.07
COL1A2P08123 AC005297.2-201ENST00000450430 606 ntBASIC2.1□□□□□ -2.07
COL1A2P08123 USP9YP10-201ENST00000454868 628 ntBASIC2.1□□□□□ -2.07
COL1A2P08123 RNU6-717P-201ENST00000459076 104 ntBASIC2.1□□□□□ -2.07
COL1A2P08123 AC104472.2-201ENST00000469035 601 ntBASIC2.1□□□□□ -2.07
COL1A2P08123 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
COL1A2P08123 AC091965.2-201ENST00000512324 613 ntBASIC2.1□□□□□ -2.07
COL1A2P08123 AC107393.1-201ENST00000512403 346 ntBASIC2.1□□□□□ -2.07
COL1A2P08123 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
COL1A2P08123 SCARNA17.1-201ENST00000516211 143 ntBASIC2.1□□□□□ -2.07
COL1A2P08123 SCARNA17.2-201ENST00000516334 143 ntBASIC2.1□□□□□ -2.07
COL1A2P08123 IGKV2D-36-201ENST00000518643 226 ntBASIC2.1□□□□□ -2.07
COL1A2P08123 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.1□□□□□ -2.07
COL1A2P08123 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
COL1A2P08123 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.1□□□□□ -2.07
COL1A2P08123 HSPE1P3-201ENST00000559254 309 ntBASIC2.1□□□□□ -2.07
COL1A2P08123 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.1□□□□□ -2.07
COL1A2P08123 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.1□□□□□ -2.07
COL1A2P08123 AC012414.6-201ENST00000568241 401 ntBASIC2.1□□□□□ -2.07
COL1A2P08123 AC103987.3-201ENST00000582071 292 ntBASIC2.1□□□□□ -2.07
COL1A2P08123 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.1□□□□□ -2.07
COL1A2P08123 U73023.1-201ENST00000603134 700 ntBASIC2.1□□□□□ -2.07
COL1A2P08123 AC025588.3-201ENST00000604182 274 ntBASIC2.1□□□□□ -2.07
COL1A2P08123 AC103710.4-201ENST00000609301 899 ntBASIC2.1□□□□□ -2.07
COL1A2P08123 MIR6895-201ENST00000613497 78 ntBASIC2.1□□□□□ -2.07
COL1A2P08123 SCARNA17.4-201ENST00000614296 143 ntBASIC2.1□□□□□ -2.07
COL1A2P08123 AL158063.1-201ENST00000615349 536 ntBASIC2.1□□□□□ -2.07
COL1A2P08123 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
COL1A2P08123 AC093536.2-201ENST00000565257 1406 ntBASIC2.09□□□□□ -2.07
COL1A2P08123 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.09□□□□□ -2.07
COL1A2P08123 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.09□□□□□ -2.07
COL1A2P08123 GDI2P1-201ENST00000429312 1336 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
COL1A2P08123 RNU6-462P-201ENST00000362659 105 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 Y_RNA.77-201ENST00000362962 107 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 U3.4-201ENST00000363352 213 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 SNORA51.11-201ENST00000384442 131 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 SNORA40.18-201ENST00000391200 128 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
COL1A2P08123 MTCYBP36-201ENST00000404146 440 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 HMGB3P2-201ENST00000411913 584 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 TPMTP2-201ENST00000414372 726 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 RPL23AP39-201ENST00000415533 405 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 EIF1AXP1-201ENST00000419267 435 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 Z99497.1-201ENST00000421282 135 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 DLGAP5P1-201ENST00000430307 464 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.09□□□□□ -2.08
COL1A2P08123 MTND4P6-201ENST00000438297 472 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 RPL7P54-201ENST00000438336 674 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 AL512286.1-201ENST00000439244 400 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 TPTE2P5-203ENST00000458118 728 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.09□□□□□ -2.08
COL1A2P08123 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
COL1A2P08123 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.09□□□□□ -2.08
COL1A2P08123 AC007182.2-201ENST00000489251 402 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.09□□□□□ -2.08
COL1A2P08123 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.09□□□□□ -2.08
COL1A2P08123 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.09□□□□□ -2.08
COL1A2P08123 AC114981.1-201ENST00000503897 678 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 AC093767.1-201ENST00000504523 156 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.09□□□□□ -2.08
COL1A2P08123 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.09□□□□□ -2.08
COL1A2P08123 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.09□□□□□ -2.08
COL1A2P08123 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.09□□□□□ -2.08
COL1A2P08123 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.09□□□□□ -2.08
COL1A2P08123 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.09□□□□□ -2.08
COL1A2P08123 OR6C73P-201ENST00000546432 358 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.09□□□□□ -2.08
COL1A2P08123 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.09□□□□□ -2.08
COL1A2P08123 AC023043.2-201ENST00000589678 1026 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 SNRPGP19-201ENST00000603826 189 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 RN7SKP299-201ENST00000606679 301 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 RNU6-88P-201ENST00000606801 100 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 AL451064.1-201ENST00000607718 471 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 AC097468.3-201ENST00000607956 456 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 AC239868.4-201ENST00000608318 671 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 AC025588.4-201ENST00000615802 908 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 MIR7844-201ENST00000616161 122 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 AC006927.3-201ENST00000638789 384 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.09□□□□□ -2.08
COL1A2P08123 MTCO1P23-201ENST00000415223 1526 ntBASIC2.09□□□□□ -2.08
COL1A2P08123 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
COL1A2P08123 AL390237.1-201ENST00000404226 1415 ntBASIC2.08□□□□□ -2.08
COL1A2P08123 AL359893.1-201ENST00000447628 1580 ntBASIC2.08□□□□□ -2.08
COL1A2P08123 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
COL1A2P08123 RNU6-343P-201ENST00000364709 104 ntBASIC2.08□□□□□ -2.08
COL1A2P08123 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL1A2P08123 HMGB1P17-201ENST00000403495 628 ntBASIC2.08□□□□□ -2.08
COL1A2P08123 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.08□□□□□ -2.08
COL1A2P08123 CYCSP46-201ENST00000423569 204 ntBASIC2.08□□□□□ -2.08
COL1A2P08123 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.08□□□□□ -2.08
COL1A2P08123 OR51AB1P-201ENST00000429046 620 ntBASIC2.08□□□□□ -2.08
COL1A2P08123 MED14P1-201ENST00000430517 648 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms