Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.39□□□□□ -1.87
MBD4O95243 AC093106.2-201ENST00000428212 385 ntBASIC3.39□□□□□ -1.87
MBD4O95243 AL591212.2-201ENST00000433923 257 ntBASIC3.39□□□□□ -1.87
MBD4O95243 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.39□□□□□ -1.87
MBD4O95243 RPL36AP6-201ENST00000435770 321 ntBASIC3.39□□□□□ -1.87
MBD4O95243 MTND2P4-201ENST00000445034 1004 ntBASIC3.39□□□□□ -1.87
MBD4O95243 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.39□□□□□ -1.87
MBD4O95243 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.39□□□□□ -1.87
MBD4O95243 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
MBD4O95243 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.39□□□□□ -1.87
MBD4O95243 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.39□□□□□ -1.87
MBD4O95243 AC025281.1-201ENST00000567026 265 ntBASIC3.39□□□□□ -1.87
MBD4O95243 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.39□□□□□ -1.87
MBD4O95243 SEPT7P9-203ENST00000604116 343 ntBASIC3.39□□□□□ -1.87
MBD4O95243 AL133173.2-201ENST00000614270 90 ntBASIC3.39□□□□□ -1.87
MBD4O95243 Z69908.1-201ENST00000622603 247 ntBASIC3.39□□□□□ -1.87
MBD4O95243 AL355596.1-201ENST00000565399 3996 ntBASIC3.38□□□□□ -1.87
MBD4O95243 AC110491.1-201ENST00000562191 2010 ntBASIC3.38□□□□□ -1.87
MBD4O95243 RNU6-778P-201ENST00000363269 103 ntBASIC3.38□□□□□ -1.87
MBD4O95243 RNU6-188P-201ENST00000364207 107 ntBASIC3.38□□□□□ -1.87
MBD4O95243 MIR634-201ENST00000385208 97 ntBASIC3.38□□□□□ -1.87
MBD4O95243 RN7SKP142-201ENST00000411236 328 ntBASIC3.38□□□□□ -1.87
MBD4O95243 MED13P1-201ENST00000428342 171 ntBASIC3.38□□□□□ -1.87
MBD4O95243 GTF2IP20-201ENST00000431663 360 ntBASIC3.38□□□□□ -1.87
MBD4O95243 AC087499.2-201ENST00000432861 149 ntBASIC3.38□□□□□ -1.87
MBD4O95243 AC009961.2-201ENST00000435771 251 ntBASIC3.38□□□□□ -1.87
MBD4O95243 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.38□□□□□ -1.87
MBD4O95243 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.38□□□□□ -1.87
MBD4O95243 AC093899.1-201ENST00000457984 376 ntBASIC3.38□□□□□ -1.87
MBD4O95243 RPS27AP10-201ENST00000496103 208 ntBASIC3.38□□□□□ -1.87
MBD4O95243 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.38□□□□□ -1.87
MBD4O95243 AC091965.2-201ENST00000512324 613 ntBASIC3.38□□□□□ -1.87
MBD4O95243 Y_RNA.695-201ENST00000516715 107 ntBASIC3.38□□□□□ -1.87
MBD4O95243 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.38□□□□□ -1.87
MBD4O95243 AC022616.3-201ENST00000523940 148 ntBASIC3.38□□□□□ -1.87
MBD4O95243 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.38□□□□□ -1.87
MBD4O95243 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.38□□□□□ -1.87
MBD4O95243 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.38□□□□□ -1.87
MBD4O95243 AC137800.2-201ENST00000574375 120 ntBASIC3.38□□□□□ -1.87
MBD4O95243 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.38□□□□□ -1.87
MBD4O95243 AC008739.2-201ENST00000597006 317 ntBASIC3.38□□□□□ -1.87
MBD4O95243 AC078899.3-201ENST00000599065 212 ntBASIC3.38□□□□□ -1.87
MBD4O95243 AC002064.3-201ENST00000623448 346 ntBASIC3.38□□□□□ -1.87
MBD4O95243 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
MBD4O95243 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
MBD4O95243 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MBD4O95243 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
MBD4O95243 AC008264.2-201ENST00000610193 3731 ntBASIC3.37□□□□□ -1.87
MBD4O95243 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
MBD4O95243 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
MBD4O95243 RNU6-39P-201ENST00000384344 107 ntBASIC3.37□□□□□ -1.87
MBD4O95243 MIR512-1-201ENST00000384913 84 ntBASIC3.37□□□□□ -1.87
MBD4O95243 MIR558-201ENST00000384920 94 ntBASIC3.37□□□□□ -1.87
MBD4O95243 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.37□□□□□ -1.87
MBD4O95243 BPY2DP-201ENST00000422208 265 ntBASIC3.37□□□□□ -1.87
MBD4O95243 SKA2P1-201ENST00000425592 390 ntBASIC3.37□□□□□ -1.87
MBD4O95243 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.37□□□□□ -1.87
MBD4O95243 AL592045.1-201ENST00000429867 352 ntBASIC3.37□□□□□ -1.87
MBD4O95243 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.37□□□□□ -1.87
MBD4O95243 AC104850.1-201ENST00000435940 476 ntBASIC3.37□□□□□ -1.87
MBD4O95243 RPS15AP5-201ENST00000436276 388 ntBASIC3.37□□□□□ -1.87
MBD4O95243 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.37□□□□□ -1.87
MBD4O95243 AL022238.1-201ENST00000442557 355 ntBASIC3.37□□□□□ -1.87
MBD4O95243 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.37□□□□□ -1.87
MBD4O95243 RPS29P20-201ENST00000489592 171 ntBASIC3.37□□□□□ -1.87
MBD4O95243 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.37□□□□□ -1.87
MBD4O95243 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.37□□□□□ -1.87
MBD4O95243 AC009901.1-201ENST00000506703 541 ntBASIC3.37□□□□□ -1.87
MBD4O95243 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.37□□□□□ -1.87
MBD4O95243 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.37□□□□□ -1.87
MBD4O95243 AC020895.1-201ENST00000595362 272 ntBASIC3.37□□□□□ -1.87
MBD4O95243 AC110760.3-201ENST00000598794 467 ntBASIC3.37□□□□□ -1.87
MBD4O95243 AL355877.2-201ENST00000603670 358 ntBASIC3.37□□□□□ -1.87
MBD4O95243 AL035413.2-201ENST00000604801 525 ntBASIC3.37□□□□□ -1.87
MBD4O95243 AC110994.2-201ENST00000635481 492 ntBASIC3.37□□□□□ -1.87
MBD4O95243 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.37□□□□□ -1.87
MBD4O95243 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
MBD4O95243 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
MBD4O95243 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
MBD4O95243 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.36□□□□□ -1.87
MBD4O95243 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
MBD4O95243 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
MBD4O95243 AC092593.1-201ENST00000515413 1815 ntBASIC3.36□□□□□ -1.87
MBD4O95243 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
MBD4O95243 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
MBD4O95243 Y_RNA.77-201ENST00000362962 107 ntBASIC3.36□□□□□ -1.87
MBD4O95243 SNORA5B-201ENST00000363786 132 ntBASIC3.36□□□□□ -1.87
MBD4O95243 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.36□□□□□ -1.87
MBD4O95243 MIR301A-201ENST00000385261 86 ntBASIC3.36□□□□□ -1.87
MBD4O95243 AL031121.1-201ENST00000406553 254 ntBASIC3.36□□□□□ -1.87
MBD4O95243 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.36□□□□□ -1.87
MBD4O95243 AC080125.1-201ENST00000414888 684 ntBASIC3.36□□□□□ -1.87
MBD4O95243 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.36□□□□□ -1.87
MBD4O95243 AC098614.2-201ENST00000426040 255 ntBASIC3.36□□□□□ -1.87
MBD4O95243 AL358075.3-201ENST00000426289 226 ntBASIC3.36□□□□□ -1.87
MBD4O95243 AC009414.1-201ENST00000427200 443 ntBASIC3.36□□□□□ -1.87
MBD4O95243 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.36□□□□□ -1.87
MBD4O95243 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.36□□□□□ -1.87
MBD4O95243 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.36□□□□□ -1.87
MBD4O95243 AC073614.1-201ENST00000438690 650 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 601.3 ms