Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 RNU6-61P-201ENST00000365528 109 ntBASIC3.11□□□□□ -1.91
GPC4O75487 SNORA7.4-201ENST00000384249 137 ntBASIC3.11□□□□□ -1.91
GPC4O75487 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
GPC4O75487 SNORA26.7-201ENST00000391288 122 ntBASIC3.11□□□□□ -1.91
GPC4O75487 RN7SKP58-201ENST00000411010 305 ntBASIC3.11□□□□□ -1.91
GPC4O75487 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.11□□□□□ -1.91
GPC4O75487 DNAJC19P4-201ENST00000440115 345 ntBASIC3.11□□□□□ -1.91
GPC4O75487 UQCRHP3-201ENST00000451503 251 ntBASIC3.11□□□□□ -1.91
GPC4O75487 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.11□□□□□ -1.91
GPC4O75487 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.11□□□□□ -1.91
GPC4O75487 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.11□□□□□ -1.91
GPC4O75487 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.11□□□□□ -1.91
GPC4O75487 AC116562.3-201ENST00000506136 177 ntBASIC3.11□□□□□ -1.91
GPC4O75487 RBBP4P6-201ENST00000508098 202 ntBASIC3.11□□□□□ -1.91
GPC4O75487 AC108078.2-201ENST00000510750 236 ntBASIC3.11□□□□□ -1.91
GPC4O75487 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.11□□□□□ -1.91
GPC4O75487 AC068587.5-201ENST00000528506 175 ntBASIC3.11□□□□□ -1.91
GPC4O75487 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.11□□□□□ -1.91
GPC4O75487 HMGB1P14-201ENST00000557424 591 ntBASIC3.11□□□□□ -1.91
GPC4O75487 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.11□□□□□ -1.91
GPC4O75487 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.11□□□□□ -1.91
GPC4O75487 YPEL5P2-201ENST00000605553 359 ntBASIC3.11□□□□□ -1.91
GPC4O75487 AC009161.2-201ENST00000624626 138 ntBASIC3.11□□□□□ -1.91
GPC4O75487 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
GPC4O75487 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
GPC4O75487 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
GPC4O75487 MTND5P1-201ENST00000445440 1375 ntBASIC3.11□□□□□ -1.91
GPC4O75487 GABRG2-229ENST00000641017 3628 ntBASIC3.11□□□□□ -1.91
GPC4O75487 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
GPC4O75487 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.1□□□□□ -1.91
GPC4O75487 AC093831.2-201ENST00000624393 3427 ntBASIC3.1□□□□□ -1.91
GPC4O75487 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
GPC4O75487 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
GPC4O75487 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
GPC4O75487 SNORA14A-201ENST00000364773 135 ntBASIC3.1□□□□□ -1.91
GPC4O75487 SNORA51.4-201ENST00000364993 124 ntBASIC3.1□□□□□ -1.91
GPC4O75487 RNU6-1103P-201ENST00000384150 107 ntBASIC3.1□□□□□ -1.91
GPC4O75487 Y_RNA.534-201ENST00000384599 112 ntBASIC3.1□□□□□ -1.91
GPC4O75487 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.1□□□□□ -1.91
GPC4O75487 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.1□□□□□ -1.91
GPC4O75487 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.1□□□□□ -1.91
GPC4O75487 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.1□□□□□ -1.91
GPC4O75487 MTCO2P19-201ENST00000427513 598 ntBASIC3.1□□□□□ -1.91
GPC4O75487 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.1□□□□□ -1.91
GPC4O75487 GPM6BP2-201ENST00000432046 144 ntBASIC3.1□□□□□ -1.91
GPC4O75487 AL591212.2-201ENST00000433923 257 ntBASIC3.1□□□□□ -1.91
GPC4O75487 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.1□□□□□ -1.91
GPC4O75487 RPL21P2-201ENST00000440049 481 ntBASIC3.1□□□□□ -1.91
GPC4O75487 GPM6BP1-201ENST00000446387 144 ntBASIC3.1□□□□□ -1.91
GPC4O75487 AC079781.2-201ENST00000446424 169 ntBASIC3.1□□□□□ -1.91
GPC4O75487 FABP5P13-201ENST00000452144 328 ntBASIC3.1□□□□□ -1.91
GPC4O75487 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.1□□□□□ -1.91
GPC4O75487 RNU6-953P-201ENST00000459154 107 ntBASIC3.1□□□□□ -1.91
GPC4O75487 RN7SL75P-201ENST00000461926 281 ntBASIC3.1□□□□□ -1.91
GPC4O75487 RPS3AP14-201ENST00000483907 780 ntBASIC3.1□□□□□ -1.91
GPC4O75487 AC023194.1-201ENST00000493084 308 ntBASIC3.1□□□□□ -1.91
GPC4O75487 SUMO2P6-201ENST00000505273 288 ntBASIC3.1□□□□□ -1.91
GPC4O75487 RNU6-677P-201ENST00000516914 101 ntBASIC3.1□□□□□ -1.91
GPC4O75487 RNA5SP165-201ENST00000517142 115 ntBASIC3.1□□□□□ -1.91
GPC4O75487 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.1□□□□□ -1.91
GPC4O75487 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
GPC4O75487 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.1□□□□□ -1.91
GPC4O75487 AC245505.1-201ENST00000556398 224 ntBASIC3.1□□□□□ -1.91
GPC4O75487 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.1□□□□□ -1.91
GPC4O75487 AC010546.1-201ENST00000569391 485 ntBASIC3.1□□□□□ -1.91
GPC4O75487 AC004223.2-201ENST00000590309 544 ntBASIC3.1□□□□□ -1.91
GPC4O75487 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.1□□□□□ -1.91
GPC4O75487 AC015540.1-201ENST00000615828 501 ntBASIC3.1□□□□□ -1.91
GPC4O75487 AC018692.3-201ENST00000623929 123 ntBASIC3.1□□□□□ -1.91
GPC4O75487 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.1□□□□□ -1.91
GPC4O75487 OR5AK4P-201ENST00000635912 903 ntBASIC3.1□□□□□ -1.91
GPC4O75487 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
GPC4O75487 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.1□□□□□ -1.91
GPC4O75487 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
GPC4O75487 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.1□□□□□ -1.91
GPC4O75487 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
GPC4O75487 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
GPC4O75487 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
GPC4O75487 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
GPC4O75487 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.09□□□□□ -1.91
GPC4O75487 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.09□□□□□ -1.91
GPC4O75487 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
GPC4O75487 FAM35BP-202ENST00000497389 3337 ntBASIC3.09□□□□□ -1.91
GPC4O75487 SNORA4.3-201ENST00000365564 137 ntBASIC3.09□□□□□ -1.91
GPC4O75487 AC068050.1-201ENST00000394891 380 ntBASIC3.09□□□□□ -1.91
GPC4O75487 UBE2V1P2-201ENST00000397758 440 ntBASIC3.09□□□□□ -1.91
GPC4O75487 RNU2-9P-201ENST00000410194 145 ntBASIC3.09□□□□□ -1.91
GPC4O75487 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
GPC4O75487 AL109913.1-201ENST00000421173 514 ntBASIC3.09□□□□□ -1.91
GPC4O75487 AL353193.1-201ENST00000421444 268 ntBASIC3.09□□□□□ -1.91
GPC4O75487 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.09□□□□□ -1.91
GPC4O75487 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.09□□□□□ -1.91
GPC4O75487 SNRPEP9-201ENST00000436794 238 ntBASIC3.09□□□□□ -1.91
GPC4O75487 AC006028.1-201ENST00000438379 402 ntBASIC3.09□□□□□ -1.91
GPC4O75487 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.09□□□□□ -1.91
GPC4O75487 RN7SL863P-201ENST00000462370 296 ntBASIC3.09□□□□□ -1.91
GPC4O75487 MRPS17P3-201ENST00000465453 385 ntBASIC3.09□□□□□ -1.91
GPC4O75487 AC233702.1-201ENST00000482905 502 ntBASIC3.09□□□□□ -1.91
GPC4O75487 RPS29P20-201ENST00000489592 171 ntBASIC3.09□□□□□ -1.91
GPC4O75487 AC139453.3-201ENST00000493276 369 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms