Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
PTCD1O75127 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTCD1O75127 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.35□□□□□ -1.55
PTCD1O75127 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.35□□□□□ -1.55
PTCD1O75127 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.35□□□□□ -1.55
PTCD1O75127 RNA5SP124-201ENST00000362739 110 ntBASIC5.35□□□□□ -1.55
PTCD1O75127 RNU6-790P-201ENST00000384479 105 ntBASIC5.35□□□□□ -1.55
PTCD1O75127 Y_RNA.534-201ENST00000384599 112 ntBASIC5.35□□□□□ -1.55
PTCD1O75127 RNU2-23P-201ENST00000410545 195 ntBASIC5.35□□□□□ -1.55
PTCD1O75127 SYF2P2-201ENST00000417620 583 ntBASIC5.35□□□□□ -1.55
PTCD1O75127 MRPS18CP6-201ENST00000423587 223 ntBASIC5.35□□□□□ -1.55
PTCD1O75127 TBCAP1-201ENST00000436520 327 ntBASIC5.35□□□□□ -1.55
PTCD1O75127 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCD1O75127 AC099799.1-201ENST00000439809 192 ntBASIC5.35□□□□□ -1.55
PTCD1O75127 AC006011.1-201ENST00000442758 349 ntBASIC5.35□□□□□ -1.55
PTCD1O75127 RPL9P32-201ENST00000464118 620 ntBASIC5.35□□□□□ -1.55
PTCD1O75127 FO393415.2-201ENST00000480085 343 ntBASIC5.35□□□□□ -1.55
PTCD1O75127 AL049874.1-201ENST00000489560 388 ntBASIC5.35□□□□□ -1.55
PTCD1O75127 AC110792.1-201ENST00000491826 472 ntBASIC5.35□□□□□ -1.55
PTCD1O75127 AC022447.4-201ENST00000504053 364 ntBASIC5.35□□□□□ -1.55
PTCD1O75127 RNU6-1023P-201ENST00000516137 106 ntBASIC5.35□□□□□ -1.55
PTCD1O75127 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCD1O75127 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCD1O75127 AL355297.3-201ENST00000604082 446 ntBASIC5.35□□□□□ -1.55
PTCD1O75127 SNORD39.4-201ENST00000620099 78 ntBASIC5.35□□□□□ -1.55
PTCD1O75127 AC006065.5-201ENST00000623427 349 ntBASIC5.35□□□□□ -1.55
PTCD1O75127 AC091903.1-201ENST00000624322 454 ntBASIC5.35□□□□□ -1.55
PTCD1O75127 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTCD1O75127 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTCD1O75127 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTCD1O75127 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTCD1O75127 MAPK10-304ENST00000641341 3984 ntBASIC5.35□□□□□ -1.55
PTCD1O75127 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTCD1O75127 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.35□□□□□ -1.55
PTCD1O75127 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTCD1O75127 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTCD1O75127 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.34□□□□□ -1.55
PTCD1O75127 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
PTCD1O75127 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTCD1O75127 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTCD1O75127 MAPK10-303ENST00000641324 3959 ntBASIC5.34□□□□□ -1.55
PTCD1O75127 UBE2L2-201ENST00000254302 429 ntBASIC5.34□□□□□ -1.55
PTCD1O75127 Y_RNA.14-201ENST00000362415 103 ntBASIC5.34□□□□□ -1.55
PTCD1O75127 Y_RNA.39-201ENST00000362620 98 ntBASIC5.34□□□□□ -1.55
PTCD1O75127 RNA5SP387-201ENST00000364226 106 ntBASIC5.34□□□□□ -1.55
PTCD1O75127 RNU6-1179P-201ENST00000384667 107 ntBASIC5.34□□□□□ -1.55
PTCD1O75127 SNORA41-201ENST00000384675 132 ntBASIC5.34□□□□□ -1.55
PTCD1O75127 MIR200C-201ENST00000384980 68 ntBASIC5.34□□□□□ -1.55
PTCD1O75127 MORN2-203ENST00000409131 544 ntTSL 5 BASIC5.34□□□□□ -1.55
PTCD1O75127 AL691449.1-201ENST00000426570 421 ntBASIC5.34□□□□□ -1.55
PTCD1O75127 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.34□□□□□ -1.55
PTCD1O75127 AC011816.1-201ENST00000441346 546 ntBASIC5.34□□□□□ -1.55
PTCD1O75127 OSTCP8-201ENST00000445117 448 ntBASIC5.34□□□□□ -1.55
PTCD1O75127 AL445433.1-201ENST00000457507 257 ntBASIC5.34□□□□□ -1.55
PTCD1O75127 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.34□□□□□ -1.55
PTCD1O75127 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.34□□□□□ -1.55
PTCD1O75127 DEFB109F-201ENST00000491870 277 ntBASIC5.34□□□□□ -1.55
PTCD1O75127 Y_RNA.673-201ENST00000516306 88 ntBASIC5.34□□□□□ -1.55
PTCD1O75127 AC022868.1-201ENST00000517767 391 ntBASIC5.34□□□□□ -1.55
PTCD1O75127 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.34□□□□□ -1.55
PTCD1O75127 HSBP1P1-201ENST00000555205 166 ntBASIC5.34□□□□□ -1.55
PTCD1O75127 AL713866.2-201ENST00000603579 219 ntBASIC5.34□□□□□ -1.55
PTCD1O75127 HMGB1P50-201ENST00000605814 607 ntBASIC5.34□□□□□ -1.55
PTCD1O75127 AC096772.1-201ENST00000609146 564 ntBASIC5.34□□□□□ -1.55
PTCD1O75127 AL021879.1-201ENST00000611756 288 ntBASIC5.34□□□□□ -1.55
PTCD1O75127 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTCD1O75127 AC034102.8-201ENST00000615146 484 ntBASIC5.34□□□□□ -1.55
PTCD1O75127 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.34□□□□□ -1.55
PTCD1O75127 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.34□□□□□ -1.55
PTCD1O75127 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTCD1O75127 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTCD1O75127 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PTCD1O75127 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.34□□□□□ -1.56
PTCD1O75127 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.34□□□□□ -1.56
PTCD1O75127 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
PTCD1O75127 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
PTCD1O75127 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.34□□□□□ -1.56
PTCD1O75127 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTCD1O75127 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PTCD1O75127 AL049555.1-201ENST00000562834 1933 ntBASIC5.33□□□□□ -1.56
PTCD1O75127 Y_RNA.314-201ENST00000365114 102 ntBASIC5.33□□□□□ -1.56
PTCD1O75127 Y_RNA.424-201ENST00000384063 103 ntBASIC5.33□□□□□ -1.56
PTCD1O75127 Y_RNA.515-201ENST00000384535 112 ntBASIC5.33□□□□□ -1.56
PTCD1O75127 AL590135.1-201ENST00000422215 156 ntBASIC5.33□□□□□ -1.56
PTCD1O75127 AL606753.1-201ENST00000427435 87 ntBASIC5.33□□□□□ -1.56
PTCD1O75127 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCD1O75127 AL133547.1-201ENST00000448546 220 ntBASIC5.33□□□□□ -1.56
PTCD1O75127 MTND4LP30-201ENST00000454092 297 ntBASIC5.33□□□□□ -1.56
PTCD1O75127 AL353752.1-201ENST00000454946 260 ntBASIC5.33□□□□□ -1.56
PTCD1O75127 AP000942.1-201ENST00000463969 747 ntBASIC5.33□□□□□ -1.56
PTCD1O75127 HSPE1P6-201ENST00000479457 291 ntBASIC5.33□□□□□ -1.56
PTCD1O75127 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCD1O75127 RNU6-927P-201ENST00000516199 100 ntBASIC5.33□□□□□ -1.56
PTCD1O75127 RNU6-143P-201ENST00000516942 93 ntBASIC5.33□□□□□ -1.56
PTCD1O75127 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.33□□□□□ -1.56
PTCD1O75127 AC087369.1-201ENST00000520775 996 ntBASIC5.33□□□□□ -1.56
PTCD1O75127 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.33□□□□□ -1.56
PTCD1O75127 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCD1O75127 AL160281.1-201ENST00000605307 311 ntBASIC5.33□□□□□ -1.56
PTCD1O75127 AL121772.2-201ENST00000614331 297 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms