Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 AC091057.3-201ENST00000602684 733 ntBASIC1.92□□□□□ -2.1
GMDSO60547 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
GMDSO60547 AC123767.1-202ENST00000620407 817 ntBASIC1.92□□□□□ -2.1
GMDSO60547 AC009831.4-201ENST00000620744 325 ntBASIC1.92□□□□□ -2.1
GMDSO60547 AP000676.3-201ENST00000623299 569 ntBASIC1.92□□□□□ -2.1
GMDSO60547 AC244517.12-201ENST00000623581 663 ntBASIC1.92□□□□□ -2.1
GMDSO60547 PCMTD1P7-201ENST00000634506 357 ntBASIC1.92□□□□□ -2.1
GMDSO60547 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
GMDSO60547 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
GMDSO60547 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
GMDSO60547 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
GMDSO60547 RNU4-82P-201ENST00000362443 140 ntBASIC1.91□□□□□ -2.1
GMDSO60547 Y_RNA.500-201ENST00000384466 111 ntBASIC1.91□□□□□ -2.1
GMDSO60547 AL135786.1-201ENST00000415892 214 ntBASIC1.91□□□□□ -2.1
GMDSO60547 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.91□□□□□ -2.1
GMDSO60547 AIMP1P2-201ENST00000425294 312 ntBASIC1.91□□□□□ -2.1
GMDSO60547 AC010153.1-201ENST00000432862 727 ntBASIC1.91□□□□□ -2.1
GMDSO60547 RPL36AP53-201ENST00000432891 316 ntBASIC1.91□□□□□ -2.1
GMDSO60547 ELOCP30-201ENST00000447108 299 ntBASIC1.91□□□□□ -2.1
GMDSO60547 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.91□□□□□ -2.1
GMDSO60547 AC010486.1-201ENST00000511793 424 ntBASIC1.91□□□□□ -2.1
GMDSO60547 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.91□□□□□ -2.1
GMDSO60547 RN7SKP258-201ENST00000517151 304 ntBASIC1.91□□□□□ -2.1
GMDSO60547 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
GMDSO60547 AC092451.2-201ENST00000538746 658 ntBASIC1.91□□□□□ -2.1
GMDSO60547 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.91□□□□□ -2.1
GMDSO60547 AL121821.2-201ENST00000556081 394 ntBASIC1.91□□□□□ -2.1
GMDSO60547 MIR3126-201ENST00000577443 74 ntBASIC1.91□□□□□ -2.1
GMDSO60547 AC060771.1-201ENST00000582031 164 ntBASIC1.91□□□□□ -2.1
GMDSO60547 VN1R83P-201ENST00000595685 445 ntBASIC1.91□□□□□ -2.1
GMDSO60547 AC098826.3-201ENST00000603823 466 ntBASIC1.91□□□□□ -2.1
GMDSO60547 AL161798.1-201ENST00000604630 131 ntBASIC1.91□□□□□ -2.1
GMDSO60547 AL158211.2-201ENST00000607282 395 ntBASIC1.91□□□□□ -2.1
GMDSO60547 MIR5739-201ENST00000619803 80 ntBASIC1.91□□□□□ -2.1
GMDSO60547 SDR42E1P4-201ENST00000620894 481 ntBASIC1.91□□□□□ -2.1
GMDSO60547 AC091932.3-201ENST00000624223 323 ntBASIC1.91□□□□□ -2.1
GMDSO60547 AL354685.2-201ENST00000448218 1447 ntBASIC1.91□□□□□ -2.1
GMDSO60547 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
GMDSO60547 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.9□□□□□ -2.1
GMDSO60547 RNA5SP289-201ENST00000362332 137 ntBASIC1.9□□□□□ -2.11
GMDSO60547 Y_RNA.311-201ENST00000365068 96 ntBASIC1.9□□□□□ -2.11
GMDSO60547 RNU6-658P-201ENST00000384606 106 ntBASIC1.9□□□□□ -2.11
GMDSO60547 RNU6-748P-201ENST00000384648 107 ntBASIC1.9□□□□□ -2.11
GMDSO60547 MIR221-201ENST00000385135 110 ntBASIC1.9□□□□□ -2.11
GMDSO60547 MIR23A-201ENST00000385245 73 ntBASIC1.9□□□□□ -2.11
GMDSO60547 CIR1P3-201ENST00000405137 479 ntBASIC1.9□□□□□ -2.11
GMDSO60547 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.9□□□□□ -2.11
GMDSO60547 USP9YP11-201ENST00000427537 717 ntBASIC1.9□□□□□ -2.11
GMDSO60547 AL356320.1-201ENST00000429616 163 ntBASIC1.9□□□□□ -2.11
GMDSO60547 HMGB1P27-201ENST00000431429 603 ntBASIC1.9□□□□□ -2.11
GMDSO60547 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.9□□□□□ -2.11
GMDSO60547 USP9YP10-201ENST00000454868 628 ntBASIC1.9□□□□□ -2.11
GMDSO60547 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.9□□□□□ -2.11
GMDSO60547 CYP2C59P-201ENST00000457790 269 ntBASIC1.9□□□□□ -2.11
GMDSO60547 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.9□□□□□ -2.11
GMDSO60547 MTND1P16-201ENST00000465177 898 ntBASIC1.9□□□□□ -2.11
GMDSO60547 AC010631.1-201ENST00000474150 156 ntBASIC1.9□□□□□ -2.11
GMDSO60547 CKS1BP2-201ENST00000497342 240 ntBASIC1.9□□□□□ -2.11
GMDSO60547 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.9□□□□□ -2.11
GMDSO60547 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
GMDSO60547 RNU2-44P-201ENST00000516795 194 ntBASIC1.9□□□□□ -2.11
GMDSO60547 RNU1-40P-201ENST00000516816 164 ntBASIC1.9□□□□□ -2.11
GMDSO60547 RNU1-97P-201ENST00000516872 164 ntBASIC1.9□□□□□ -2.11
GMDSO60547 RNU6-703P-201ENST00000516946 107 ntBASIC1.9□□□□□ -2.11
GMDSO60547 SNORA31.25-201ENST00000517242 134 ntBASIC1.9□□□□□ -2.11
GMDSO60547 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.9□□□□□ -2.11
GMDSO60547 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.9□□□□□ -2.11
GMDSO60547 AC012493.3-201ENST00000604494 112 ntBASIC1.9□□□□□ -2.11
GMDSO60547 AL138963.2-201ENST00000605137 226 ntBASIC1.9□□□□□ -2.11
GMDSO60547 AC092574.1-201ENST00000609771 420 ntBASIC1.9□□□□□ -2.11
GMDSO60547 AC103710.1-201ENST00000610003 901 ntBASIC1.9□□□□□ -2.11
GMDSO60547 AC097655.1-201ENST00000635075 318 ntBASIC1.9□□□□□ -2.11
GMDSO60547 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
GMDSO60547 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.9□□□□□ -2.11
GMDSO60547 RNU6-621P-201ENST00000364752 109 ntBASIC1.89□□□□□ -2.11
GMDSO60547 RNA5SP160-201ENST00000364866 120 ntBASIC1.89□□□□□ -2.11
GMDSO60547 BTF3P7-201ENST00000407097 488 ntBASIC1.89□□□□□ -2.11
GMDSO60547 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.89□□□□□ -2.11
GMDSO60547 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.89□□□□□ -2.11
GMDSO60547 AL591719.1-201ENST00000444669 744 ntBASIC1.89□□□□□ -2.11
GMDSO60547 AL021397.1-201ENST00000451806 248 ntBASIC1.89□□□□□ -2.11
GMDSO60547 FABP5P15-201ENST00000453566 214 ntBASIC1.89□□□□□ -2.11
GMDSO60547 RNU7-59P-201ENST00000459101 61 ntBASIC1.89□□□□□ -2.11
GMDSO60547 AC005410.1-202ENST00000460347 485 ntBASIC1.89□□□□□ -2.11
GMDSO60547 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.89□□□□□ -2.11
GMDSO60547 AC117503.1-201ENST00000472241 394 ntBASIC1.89□□□□□ -2.11
GMDSO60547 AC055731.1-201ENST00000474387 401 ntBASIC1.89□□□□□ -2.11
GMDSO60547 UBE2DNL-203ENST00000474922 222 ntBASIC1.89□□□□□ -2.11
GMDSO60547 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.89□□□□□ -2.11
GMDSO60547 RNA5SP216-201ENST00000516111 123 ntBASIC1.89□□□□□ -2.11
GMDSO60547 RNU2-19P-201ENST00000517288 84 ntBASIC1.89□□□□□ -2.11
GMDSO60547 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.89□□□□□ -2.11
GMDSO60547 OR11H5P-201ENST00000554039 926 ntBASIC1.89□□□□□ -2.11
GMDSO60547 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.89□□□□□ -2.11
GMDSO60547 MIR4435-1-201ENST00000582552 80 ntBASIC1.89□□□□□ -2.11
GMDSO60547 MIR3935-201ENST00000583472 104 ntBASIC1.89□□□□□ -2.11
GMDSO60547 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.89□□□□□ -2.11
GMDSO60547 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.89□□□□□ -2.11
GMDSO60547 AC007490.1-201ENST00000624321 703 ntBASIC1.89□□□□□ -2.11
GMDSO60547 AC008555.8-201ENST00000623602 2168 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms