Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 AC108738.1-201ENST00000603703 237 ntBASIC8.43□□□□□ -1.06
MSH5O43196 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
MSH5O43196 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
MSH5O43196 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC8.43□□□□□ -1.06
MSH5O43196 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC8.43□□□□□ -1.06
MSH5O43196 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC8.42□□□□□ -1.06
MSH5O43196 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
MSH5O43196 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
MSH5O43196 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
MSH5O43196 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
MSH5O43196 AC106871.1-201ENST00000568324 3102 ntBASIC8.42□□□□□ -1.06
MSH5O43196 RNU6-679P-201ENST00000391003 106 ntBASIC8.42□□□□□ -1.06
MSH5O43196 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC8.42□□□□□ -1.06
MSH5O43196 FAR2P2-201ENST00000413041 594 ntBASIC8.42□□□□□ -1.06
MSH5O43196 AL121890.1-201ENST00000435457 205 ntBASIC8.42□□□□□ -1.06
MSH5O43196 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC8.42□□□□□ -1.06
MSH5O43196 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
MSH5O43196 BX276092.4-201ENST00000452056 248 ntBASIC8.42□□□□□ -1.06
MSH5O43196 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
MSH5O43196 AC098847.1-201ENST00000473094 348 ntBASIC8.42□□□□□ -1.06
MSH5O43196 RPS20P22-201ENST00000473700 357 ntBASIC8.42□□□□□ -1.06
MSH5O43196 AC006539.1-201ENST00000481419 501 ntBASIC8.42□□□□□ -1.06
MSH5O43196 MIR6826-201ENST00000617808 98 ntBASIC8.42□□□□□ -1.06
MSH5O43196 AC064859.1-201ENST00000624741 174 ntBASIC8.42□□□□□ -1.06
MSH5O43196 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
MSH5O43196 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
MSH5O43196 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
MSH5O43196 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
MSH5O43196 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
MSH5O43196 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
MSH5O43196 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
MSH5O43196 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
MSH5O43196 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
MSH5O43196 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
MSH5O43196 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
MSH5O43196 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC8.41□□□□□ -1.06
MSH5O43196 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
MSH5O43196 Y_RNA.377-201ENST00000365644 108 ntBASIC8.41□□□□□ -1.06
MSH5O43196 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
MSH5O43196 Z98749.2-208ENST00000381646 500 ntBASIC8.41□□□□□ -1.06
MSH5O43196 Z85995.1-201ENST00000415547 335 ntBASIC8.41□□□□□ -1.06
MSH5O43196 AC007919.1-201ENST00000429380 217 ntBASIC8.41□□□□□ -1.06
MSH5O43196 AL353705.1-201ENST00000433468 480 ntBASIC8.41□□□□□ -1.06
MSH5O43196 AP001486.1-201ENST00000463339 476 ntBASIC8.41□□□□□ -1.06
MSH5O43196 RPSAP50-201ENST00000481955 852 ntBASIC8.41□□□□□ -1.06
MSH5O43196 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC8.41□□□□□ -1.06
MSH5O43196 LSM3P4-201ENST00000502948 309 ntBASIC8.41□□□□□ -1.06
MSH5O43196 SNORD46.2-201ENST00000516021 102 ntBASIC8.41□□□□□ -1.06
MSH5O43196 HMGN2P36-201ENST00000529541 409 ntBASIC8.41□□□□□ -1.06
MSH5O43196 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC8.41□□□□□ -1.06
MSH5O43196 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC8.41□□□□□ -1.06
MSH5O43196 AC018692.3-201ENST00000623929 123 ntBASIC8.41□□□□□ -1.06
MSH5O43196 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC8.41□□□□□ -1.06
MSH5O43196 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
MSH5O43196 AC016588.2-201ENST00000632484 3021 ntBASIC8.41□□□□□ -1.06
MSH5O43196 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
MSH5O43196 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
MSH5O43196 DMD-228ENST00000541735 7080 ntTSL 5 BASIC8.41□□□□□ -1.06
MSH5O43196 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
MSH5O43196 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
MSH5O43196 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
MSH5O43196 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
MSH5O43196 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
MSH5O43196 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
MSH5O43196 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
MSH5O43196 RPL23AP56-201ENST00000460778 453 ntBASIC8.4□□□□□ -1.06
MSH5O43196 AC124945.1-201ENST00000485133 188 ntBASIC8.4□□□□□ -1.06
MSH5O43196 AC025458.1-201ENST00000506046 166 ntBASIC8.4□□□□□ -1.06
MSH5O43196 RNU6-63P-201ENST00000516690 95 ntBASIC8.4□□□□□ -1.06
MSH5O43196 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC8.4□□□□□ -1.06
MSH5O43196 RPS15AP11-201ENST00000594193 385 ntBASIC8.4□□□□□ -1.06
MSH5O43196 AC092266.1-201ENST00000610958 165 ntBASIC8.4□□□□□ -1.06
MSH5O43196 TCL6_3.1-201ENST00000619064 137 ntBASIC8.4□□□□□ -1.06
MSH5O43196 AC024884.1-201ENST00000620583 399 ntBASIC8.4□□□□□ -1.06
MSH5O43196 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC8.4□□□□□ -1.06
MSH5O43196 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
MSH5O43196 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
MSH5O43196 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
MSH5O43196 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
MSH5O43196 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
MSH5O43196 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
MSH5O43196 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
MSH5O43196 FAM91A3P-201ENST00000456826 2544 ntBASIC8.39□□□□□ -1.07
MSH5O43196 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
MSH5O43196 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
MSH5O43196 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
MSH5O43196 SNORD115-37-201ENST00000363768 82 ntBASIC8.39□□□□□ -1.07
MSH5O43196 Y_RNA.796-201ENST00000364268 102 ntBASIC8.39□□□□□ -1.07
MSH5O43196 Y_RNA.799-201ENST00000364992 102 ntBASIC8.39□□□□□ -1.07
MSH5O43196 MIR518D-201ENST00000385014 87 ntBASIC8.39□□□□□ -1.07
MSH5O43196 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC8.39□□□□□ -1.07
MSH5O43196 BX276092.6-201ENST00000430476 250 ntBASIC8.39□□□□□ -1.07
MSH5O43196 BX276092.8-201ENST00000455722 250 ntBASIC8.39□□□□□ -1.07
MSH5O43196 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC8.39□□□□□ -1.07
MSH5O43196 RNU6-634P-201ENST00000459134 106 ntBASIC8.39□□□□□ -1.07
MSH5O43196 MIR4305-201ENST00000583252 102 ntBASIC8.39□□□□□ -1.07
MSH5O43196 AP001264.1-201ENST00000620602 703 ntBASIC8.39□□□□□ -1.07
MSH5O43196 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC8.39□□□□□ -1.07
MSH5O43196 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
MSH5O43196 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms